Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4586 |
Symbol | |
ID | 8022274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1232651 |
End bp | 1233589 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833358 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_002984498 |
Protein GI | 241666139 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.546959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.879793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAT ACAGCCCCAA AGAGTTCGCC CAACAGATCG GCTCCGGTCT GCTGTCCTTC CCCATCACGC ACTTCAAGGC GTCGGATCTG TCGTTCGACG AGGCCGCGTA TCGCGCCAAC CTCAGCTGGC TGTTCAGCCA CGAGGCAGCC GGCCTGTTTG CGGCGGGTGG CACGGGCGAA TTCTTCTCGC TCACCGCAGC TGAGACGGAC CGCGTGGTGC GTGCTGCCGT GGCTGAAACC GCCGGCAAGA TTCCGGTGAT CGCCCCGGCC GGCCGCGGCA CGGCCGAATC GATCGAATAC TGCAAAGCCG CAGAAGCTGC CGGCGCCGAC GGCATCCTGC TGCTGCCGCC GTACCTGACC GAAGCCTCTG CCGACGGCGT GGCCGCGCAC GTGGAGCAGG TCTGCAAATC GACCAAGCTC GGCGTGATCG TCTACAACCG CGCCAACCAG GTCCTCGACG AGAACCACCT GGAACGCCTG GCAGACCGCT GCCCGAACCT GGTCGGCTTC AAGGACGGCG TGGGCGATCT GGAACTGATG ACGCGCATTT ACGCCCGCCT GGGCGACCGC TTTACCTATG TCGGCGGCCT GCCGACGGCC GAGACTTTTG CACTGCCGTA CCTGACGATG GGCGTGACGA CGTATTCGTC GGCCATCTTC AACTTCGTGC CGAAGTTCGC GCTAGAGTTC TACGCCGCCG TGCGCGCGTT CGACAATGCC AAGGTCTACA AGATGCTCAA CGAGTTCGTG CTGCCGTACA TCCAGCTGCG CAACCGCAAG CGCGGCTATG CGGTGTCGAT CGTCAAGGCC GGTATGAAGG TCATCGGCCG TGACGCAGGT CCGGTCCGTG CTCCGTTGAC CGACCTGACC GACGCCGAGA TTGCAGAACT GTCGGCGTTG GTGTCGCGCG TTGCCGAAGT GGAAAAGCTG GCGGCCTGA
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Protein sequence | MSRYSPKEFA QQIGSGLLSF PITHFKASDL SFDEAAYRAN LSWLFSHEAA GLFAAGGTGE FFSLTAAETD RVVRAAVAET AGKIPVIAPA GRGTAESIEY CKAAEAAGAD GILLLPPYLT EASADGVAAH VEQVCKSTKL GVIVYNRANQ VLDENHLERL ADRCPNLVGF KDGVGDLELM TRIYARLGDR FTYVGGLPTA ETFALPYLTM GVTTYSSAIF NFVPKFALEF YAAVRAFDNA KVYKMLNEFV LPYIQLRNRK RGYAVSIVKA GMKVIGRDAG PVRAPLTDLT DAEIAELSAL VSRVAEVEKL AA
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