Gene Rpic12D_4568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4568 
Symbol 
ID8022256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1206264 
End bp1206731 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID644833341 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002984481 
Protein GI241666122 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0446023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.17585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCG ATGAAATTTG TTCCCACCGC ATCGTTCACG TCCAGGCGAC GGCGACGCTG 
CAGCAAGCCG CCCGGCTGAT GCGGGACGAA AGCGCCCGGG CGCTGCTTGT CACGGAACAC
GCCGCTGGGG GTTCTCGGGT GGTGGGCATC GTGACAGACC GGGACATGGT GGTGCACGGC
CTTGCCAGCC GCAGCGACTG CAGCCAGACC GCCGTATCGG AAGTCATGAC GCGCGGCCTT
CTGACCATCC ACGATGACGC CGTGATCAGC GAAGCCTTGC GCTCGATGCT GAGCCACGGC
CTGCACCGTC TGGCGGTGGT CGATCGTCAG CAACGGCTGG TGGGCATGCT CAGCCTGGAC
GACACCATCC GCGCAATGGG TGGCGAATGG ACCTTGCTGG CCGGCATTCT CGGTCGCGAC
AACGCTGGCC AGTCCCGCCA GCACGCGCCG TCCGATTTGA TTCTCTAA
 
Protein sequence
MRVDEICSHR IVHVQATATL QQAARLMRDE SARALLVTEH AAGGSRVVGI VTDRDMVVHG 
LASRSDCSQT AVSEVMTRGL LTIHDDAVIS EALRSMLSHG LHRLAVVDRQ QRLVGMLSLD
DTIRAMGGEW TLLAGILGRD NAGQSRQHAP SDLIL