| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4560 |
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| Symbol | |
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| ID | 8022248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1199732 |
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| End bp | 1201120 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644833333 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002984473 |
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| Protein GI | 241666114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.140942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.159095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTATG TTGATTGCAT CCCGACCTTT TGGTGGTGCT CGGTGGCGGA GCAAGATACT
CAATCCTCAA AGGCAACGCA CAGGCGGCTG CTGCAGTTGC AATCCACTTC GGCCGAACTG
GTGGTGGGGG TGCTGGCCGT TTTGCTGCTG GCGGCGGCAG TTGCCCGGCT GGCGTTTGCG
CTTCAGGCCG GGGATGCCCC CTTCATTTTG CTGGCCTCGG CAAGTATTTC TGCGGTCATC
GCACTGGTCT TCTATTGGCT GCGGCTGCGG AAGTTGCGAG CCGCCGTCGC CCGGGATCTG
ACGTACCTAG AAAAGAGCGA AGCGCGGCTG GCCGGCATCA TCCGGTCATC AATGGAAGCC
ATCATTTCGG TGGACGAAAC CCAGCGCATC GTGCTCTTCA ATCCCATGGC TGAAACTCTG
TTCGGTTGTT CAGCGCGCCA AGCCATCGGC CGCCCACTGT CAGACTTTAT TCCCGAGCGG
TTTCGCGGCG CGCACGAAGC GCATGTACGG CGCTTCGGGG TGACGGGCGT ATCGGAGCGC
CAGATGGGTA AGCAGCGCCC GCTGTTTGCC CTGCATACCG ATGGGCGCGA ATTCCCGATC
GAAGCGTCGA TTTCACAGAT CGAAGTGAAC GGCGGCAAGC TCTTCACGGT GATGCTGCGC
GACACCACGG AGCGTGTGCG TGCGGAAGCG GCGCTGCGGC GCTCCCAGGA AGAACTGCAG
CATCTGTCGG ACAGCATCCT GGCCACGCGC GAGGAGGAGC GGCACCGCAT CGCCCGCGAG
CTGCACGACG ATCTGGGCCA ACGCCTGAGC GCGCTCAAGA TGGACATTTC GCTGCTGGCA
GCGGATCTGC AGGCCGCACG GAGCGACAAG GCGCTGATCG ACCAGACCCA GGCAATGCAA
CACGTGATCG ACGAGACGAT TGTTGCCGTT CGGCATATCT CGGCGGATCT TCGGCCGCCA
TTGCTCGACG AGTTGGGGCT CGTGCCGTCC CTCGAATGGA TGGCCAAGAA TTTTCGCCAA
CGCTTTGGCC TGGTCGTGAC TGTGCATGCG CAAGAACTGG CGATGAACGA GCGCGCTGCC
ATCTCGGTGT TCCGGATCGT GCAGGAGGCA CTCAACAACG TCGTGCGCCA CGCCGATGCC
ACGCGTGTTG AGATCGAGTT CTCGCAGCAG GACGACGTGC TCGAACTGTC CATTCAAGAC
AATGGCCATG GCTGGAGTGG GGCGCCTCCG GCGGTGGGTG AACGCAAGCC GCTGGGATTG
CTTGGCATTC GCGAGCGCGC CCGGCTACTG GGCGGGCAGG CAACGATCAC ACATGCACCT
GGTGGCGGCT TTCGCTTGAG CGTGAGCTTT CCCGCCGTTC ACAAGGCCAC CGAGGAGGCG
CCGTCATGA
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| Protein sequence | MGYVDCIPTF WWCSVAEQDT QSSKATHRRL LQLQSTSAEL VVGVLAVLLL AAAVARLAFA
LQAGDAPFIL LASASISAVI ALVFYWLRLR KLRAAVARDL TYLEKSEARL AGIIRSSMEA
IISVDETQRI VLFNPMAETL FGCSARQAIG RPLSDFIPER FRGAHEAHVR RFGVTGVSER
QMGKQRPLFA LHTDGREFPI EASISQIEVN GGKLFTVMLR DTTERVRAEA ALRRSQEELQ
HLSDSILATR EEERHRIARE LHDDLGQRLS ALKMDISLLA ADLQAARSDK ALIDQTQAMQ
HVIDETIVAV RHISADLRPP LLDELGLVPS LEWMAKNFRQ RFGLVVTVHA QELAMNERAA
ISVFRIVQEA LNNVVRHADA TRVEIEFSQQ DDVLELSIQD NGHGWSGAPP AVGERKPLGL
LGIRERARLL GGQATITHAP GGGFRLSVSF PAVHKATEEA PS
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