Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4513 |
Symbol | |
ID | 8022201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1150562 |
End bp | 1151926 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833287 |
Product | beta-lactamase domain protein |
Protein accession | YP_002984427 |
Protein GI | 241666068 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0937857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.557779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGC AATTTCTCGG CGCAACCGAC ACGGTGACGG GCTCAAAGTA TGTGCTTGAG ACCGGCGCGC ACCGTGTGAT GGTCGACTGC GGGCTGTTTC AGGGCTACAA GTCGCTGCGT CTGCGCAACT GGGACAAGCT TGCCGTCAAC CCGCATCACA TCGATGCGGT CGTGCTCACG CATGCCCATA TCGACCACAG CGGCTACCTG CCGCTGCTCG TGCGCAATGG GTTTCATGGT CCGGTCTATT GCACGAAAGG CACGGCAGAA CTGTGCAACA TCCTGCTGCC TGACAGCGCT CGGCTTGCGC AGGAGGATGC ACAGTACGCG AACGCCGAGG GGTTCTCGCG CCATCATCCC GCGTTGCCGC TCTATGACGA AAAGGACGCC GCCAGGGCGT TACGCCGGCT GCATCCCGTC GGCTATGGCG AGCGCTTCTC CGTTGCCGAC GGCGTGGAAG CGGAGTTCCA CCGTGCAGGA CACATCATCG GTGCGGCCAC GGCAACATTG CTGACCGAGG GGCGCCGCAT TGTCTTCTCC GGCGACCTGG GGCGGCAGGT CGATCCCGTC ATGCGGCCAC CCGAGCCCAT TGCGGAGGCC GATACCCTGT TGGTCGAATC GACCTATGGC GATCGCGTGC ATCCGGAGGG GGACCCGCTC GATGCACTCG AGCAGGTTGT GCAGCGGACC ATCGGGCAGG GCGGCACGCT GCTGATCCCG GCTTTCGCTG TGGGGCGTAC GCAGGAGCTT CTGTATTGCC TTTACATGCT GATCCGCGAG CATCGGATTC CACATGTGCC GATCTACCTC GACAGCCCGA TGGCCGAACT GGCGACGGGG GTGTTTGCGC ATCATATTGA CGATCTGCAT ATCGAGGCTG CCGACTGCCA GGCCGCCTGT GCATTGGCCA TTCCGGTGCA GAGCCCTGAA CAGTCGAGGC ATCTGGGGAA CGATCGCGCG CCCAAGATCA TTCTTGCGGC AAGCGGCATG GCGACCGGCG GGCGGGTGCT GCATCACCTC AAGAGCTTTG GCGGCGGCAA GCGCAACGCC ATCCTGATGT CGGGCTTCCA GGCCGCCGGC ACGCGGGGCG CCGCGCTGCT GGCCGGTCAA AGGGCGTTGC GCGTGCACGG ACGCGAGGTT GCCATCCGAG CCTCGGTTGA GCAGATCCAG AATCTGTCCG CCCACGCGGA TGCCAATGAA CTGATGACCT GGTTACGGGG CTTCACGCGG CCGCCACAGC AGACCTTCAT CGTGCATGGC GAGCCAGCCG CCAGCGACGC CTTGCGCCAG CGGATCGAGC ATGAATTGCA GTGGCCGGTC CGCATGCCGG AGTACCGCCA GTCCTACGAA CTGGAGGGTG CATGA
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Protein sequence | MRLQFLGATD TVTGSKYVLE TGAHRVMVDC GLFQGYKSLR LRNWDKLAVN PHHIDAVVLT HAHIDHSGYL PLLVRNGFHG PVYCTKGTAE LCNILLPDSA RLAQEDAQYA NAEGFSRHHP ALPLYDEKDA ARALRRLHPV GYGERFSVAD GVEAEFHRAG HIIGAATATL LTEGRRIVFS GDLGRQVDPV MRPPEPIAEA DTLLVESTYG DRVHPEGDPL DALEQVVQRT IGQGGTLLIP AFAVGRTQEL LYCLYMLIRE HRIPHVPIYL DSPMAELATG VFAHHIDDLH IEAADCQAAC ALAIPVQSPE QSRHLGNDRA PKIILAASGM ATGGRVLHHL KSFGGGKRNA ILMSGFQAAG TRGAALLAGQ RALRVHGREV AIRASVEQIQ NLSAHADANE LMTWLRGFTR PPQQTFIVHG EPAASDALRQ RIEHELQWPV RMPEYRQSYE LEGA
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