| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4485 |
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| Symbol | |
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| ID | 8022173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1119895 |
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| End bp | 1121946 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644833259 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_002984399 |
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| Protein GI | 241666040 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000194972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCTGGG ACGGGCTGCG CCCCGACTCA GTCAATGCAA CCGATACACC AAATCTGTAT
GCATTACGCC AGGCGGGTGT CAACTTCAGC GACAACCACT CGACGTACCC GACCTTCACG
ATGATGAACG GCTCGTCCTT TGCGACAGGC GCGTTCCCGA AGACCAGCGG GTTCTATGGC
AACACCTTCT GGACGCCGCC GCAGGGAGCG ACCAACAGCA TTCCCGCGGG CAACCTCGGG
ACGCCGAATA GCACCAAAAC TGCGGCTGCA TCGGCAGACT ATGTCGACCC GATCTTCACC
GAGGACTACC AAGTCCTGAC CACTCTGAAC AATTACTACG GGGGGCAGCT GCTTCTGGTG
AAGAGCCTCT TTGCTGCGGC CCAGGCTACA GGCCTGACGA CTGCGACCGT CGGCAAGTCG
GGAGCTGCGT TTATCCAGGA TCTGGGGCAG GGTGGGTACT TCCTTGATGA GAACACGGTA
CAGCCGCGTA GCCTCGTCAC CGAACTGCAG AGCGCCGGCT ATGCATTGCC GTTCAATACG
CAGTTTGGAT ACTCGGGGTC CAACGCTGTC ACGCTGGCCG CGACGAACGG AGATCCGACC
GCGCGCGCCG GCTACATCAC CTTCAACACA ACGGCCTATG ACAGTGCGAG TGGCGTGACC
GCCGTCGCAG CCCGCGACAG CAGTGATACC ACGCAGGGGG CCCCTGAAGA TGCCGCCAAC
AAATACATGT TGTCGGTGTT CACCAACTAC ATCCTGCCGA TGAAGCAGCC GATGCTTTCG
CTCATCTGGT TCCGCACACC CGATAACGTC GAGCACGGCT ATGGCCCGGG GTCGGCGAAT
GCGATTGCCG GCTTGCGCTC ACAGGATCAG CGTCTCGGCG AGCTGGTCAG TGCACTGAAG
GCGAACAACC TGTACGCAAG TACCAACCTG ATCGTTGTCT CGGACCATGG CCACTCTAGT
GTTTCTGGCC CGCTTTCGCT TTACCCACTG CGCGCCATCA CGCCTTCGGG AACGGCACCC
GGCGGCACGC CAGTCAATGG CGCAACCAGC GGCACGGATG CAGCTGCCAT TGGTGCGGTG
TCAGCCACGG GCTACTCCTT CTCTGGCGAC GTTCGCTCGG CCGATTTGCT GACCTATCGG
GGATTCAAGG CATACGACGG CTCGGGTTGT ACAACCTCCG CCATGTACGG TCTGCAGGCA
AACGGTACGC CCACCGTGCC AGTCAAGGTT GACACGACCG GCTCGCTGTG TGGCACGGCC
AATACGAAGT ACCAGGCTAT CAGCGCAAGC CTGGCGACGC CTGTTGCCAG TTTCAAGGTG
CCTGCCCCGG GCAACCTCAC GGCCAATGGC ATTGTGGTGG CCGCAAACGG CGGGTCCGAT
TACTTCTATG TGCCAAGCCA TGACGCGACC ACAGTACAGA ATCTTGTGAA GGTGCTGCAG
CAACGCGAAG AGTATGGCGC GATCTTCGTC GATAGCCGGT ATGGCGCGCT GCCTGGCACG
CTGCCCATGT CCATGGTCAA TCTGGAAAAC GCGCAGCGGC AGAACAATGG TCAGCCTGAT
GTGGTGGTCA GCTTCAACTG GGATGATCAG GTCGCGATCA AGGGCATGCC CGGCATCGAG
TTCGAAAGCG CGGGCGGCCA GCGTGGCATG CACGGTAGCT TCGGTACGAC AGACGTGCAT
AACACGTTGA TTGCGAGCGG CCCATCCTTC CGCTCCAGCA CCGTTGTGAC CAATCCCACA
GGCAACGTTG ACGTGGCGCC GACGGTTGCT TACCTGTTGG GCCTGTCGAT GCCGCAGGCT
GATGGCCGCA TCCTGAACGA AGCGCTGCTC AATCCGGCAA GCCCGACTGC GCCGAGCGTC
AAGGCGTCGA CGGTAAATCC GGTGTCACCC GCAACGGGGC TCAGCTTTGA GGTGCCGACC
GACCCGACGG GAGCGACAAA GGATGCTGCG CTGACGCAGG GCAGCTACAC CATCAACCTG
GCCGTGAAGG ATCTGAGCGT TGACGGTAAA ACCTATCGAT ACTTTGACTA TGCCAAGGCT
GTCCGTCAGT AA
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| Protein sequence | MVWDGLRPDS VNATDTPNLY ALRQAGVNFS DNHSTYPTFT MMNGSSFATG AFPKTSGFYG
NTFWTPPQGA TNSIPAGNLG TPNSTKTAAA SADYVDPIFT EDYQVLTTLN NYYGGQLLLV
KSLFAAAQAT GLTTATVGKS GAAFIQDLGQ GGYFLDENTV QPRSLVTELQ SAGYALPFNT
QFGYSGSNAV TLAATNGDPT ARAGYITFNT TAYDSASGVT AVAARDSSDT TQGAPEDAAN
KYMLSVFTNY ILPMKQPMLS LIWFRTPDNV EHGYGPGSAN AIAGLRSQDQ RLGELVSALK
ANNLYASTNL IVVSDHGHSS VSGPLSLYPL RAITPSGTAP GGTPVNGATS GTDAAAIGAV
SATGYSFSGD VRSADLLTYR GFKAYDGSGC TTSAMYGLQA NGTPTVPVKV DTTGSLCGTA
NTKYQAISAS LATPVASFKV PAPGNLTANG IVVAANGGSD YFYVPSHDAT TVQNLVKVLQ
QREEYGAIFV DSRYGALPGT LPMSMVNLEN AQRQNNGQPD VVVSFNWDDQ VAIKGMPGIE
FESAGGQRGM HGSFGTTDVH NTLIASGPSF RSSTVVTNPT GNVDVAPTVA YLLGLSMPQA
DGRILNEALL NPASPTAPSV KASTVNPVSP ATGLSFEVPT DPTGATKDAA LTQGSYTINL
AVKDLSVDGK TYRYFDYAKA VRQ
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