Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4460 |
Symbol | |
ID | 8022148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1099113 |
End bp | 1100534 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833234 |
Product | Aldehyde Dehydrogenase |
Protein accession | YP_002984374 |
Protein GI | 241666015 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.244749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00200414 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCAAG GCTCCCCCAC CGAGCTTGTC GCCAGCTTTG AACGCCAGAG ACAGGCTTTC GCGCTGGCCC CCGACCCGAC ACTGGCCACG CGCCTGTCGC GTCTCGATCG GCTCGCGGCC TGGCTCGACT CGCACGAGCC GGACATCGTG CGTGCCATCG ACGCCGACTT TCAAGGCCGC TCGGCGCATG AAACCCGGCT TGCCGAAGTG TTTGTCGTGC GCGCGGGCAT CCGTCATGCG CGGCGCCACC TGAAGCAGTG GATGCGCACG CAACGCGTGC CGACCGCATT GCATTTCCGC CCCGGCTACA ACCGGCTCAT GCCGCAGCCG CTGGGTGTGG TGGGCATCAT TGCGCCGTGG AACTATCCGC TGCAACTGTC GTTGGGGCCA GCGCTTGCGG CGCTTGCGGC AGGCAACCGG GTATTGATCA AGCCGTCGGA GCTCACGCCT CGGCTGTCAG CGTTGCTCGC TTCGATGGCG CGCGAGATAT TCAACCCGGA TGAGCTCGAT GTCGCCATCG GCGATGTCGA ACTCGGCAAG GCCTTTGCCA GCCTGCCGTT CGATCACCTG TTCTTCACCG GTTCCACGCA GGTCGGGCGT GACGTGGCGC AAGCGGCGGC GGCCAATCTG ACGCCGGTGA CGCTGGAACT CGGCGGCAAA TCGCCAGCCA TTCTTGATGT GTCGTGCAAT GTCGCTGTTG CGGCGCAACG CATCGCATTC GGCAAGCTGT TGAACGCAGG GCAAACCTGC GTCGCGCCGG ATTACCTGCT CGTGCCGACA GGTACGGCGG AAAACGTCGC ATCGCATCTG GAGCGGGCCA TCACGAAGCT CTATCCGAAT CTGACTGCCA ACCCCGACTA CACCGCGATC ATCAGCGAAC GCCACCGTGC GCGCCTGGCA GAGATGGTCC GCGAGGCGCG CACCGCAGGC GCACAAGTGA TCGAGGTCAA CCCGGCTGGC GAAGTGTTCA ACGCGGCATC ACGCAAGCTC CCGCCCACGC TCGTGATTGG CGCACCCGCC GCCACGCGGC TCATGCGTGA AGAGATCTTT GGCCCCGTGC TGCCCATTGT CGAATACGCA AACCTCGACG ATGCGCTGGC GTATGTCCAG CGCAACGCCC GCCCGCTCGC GCTGTACTGG TTTGGTGACG ATGCATCGCG CTGCAACCGC GCACTGCGCG AAACCGTATC GGGCGGTGTG ACGATCAACG ATTGCCTGTG GCATCTGGCA CAGGAGAGCC AGCCGTTCGG CGGCGTCGGC CCCAGCGGCA TGGGCGCCTA CCACGGCAAG TGGGGCTTCG ATACCTTCAG CAAGCGCAAG CCGGTCTTTC ATCAGACCCG CTGGAATGGC ACTGCGCTGT TCCACCCGCC CTACGGCCAT ACCTTCAACT GGCTGCTGCG CGTGCTGTCG CGCATTGCCT GA
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Protein sequence | MLQGSPTELV ASFERQRQAF ALAPDPTLAT RLSRLDRLAA WLDSHEPDIV RAIDADFQGR SAHETRLAEV FVVRAGIRHA RRHLKQWMRT QRVPTALHFR PGYNRLMPQP LGVVGIIAPW NYPLQLSLGP ALAALAAGNR VLIKPSELTP RLSALLASMA REIFNPDELD VAIGDVELGK AFASLPFDHL FFTGSTQVGR DVAQAAAANL TPVTLELGGK SPAILDVSCN VAVAAQRIAF GKLLNAGQTC VAPDYLLVPT GTAENVASHL ERAITKLYPN LTANPDYTAI ISERHRARLA EMVREARTAG AQVIEVNPAG EVFNAASRKL PPTLVIGAPA ATRLMREEIF GPVLPIVEYA NLDDALAYVQ RNARPLALYW FGDDASRCNR ALRETVSGGV TINDCLWHLA QESQPFGGVG PSGMGAYHGK WGFDTFSKRK PVFHQTRWNG TALFHPPYGH TFNWLLRVLS RIA
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