Gene Rpic12D_4429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4429 
Symbol 
ID8022117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1062926 
End bp1064095 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content67% 
IMG OID644833203 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_002984343 
Protein GI241665984 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0240363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.58487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGT TCCAACAGCC GGTACGTTTC GACACGGTCC CTTCCATCCT CCAGGAGTGG 
GGCGCCGCGC GCCGCCTCGG AGAGCTCTTG GCCGCATGGA CCGAGCGCCG CAGTGTGCTG
GTCGTCACCG ATGGTGGCCT GCACAAGGCC GGGGTGCTGG AGAGCGCCAA GGCATCGCTG
GCGACCGCCG GCTTCCGCGT GACCGTTTTC GACGAGGTCG TGGCCGATCC GCCTGAGGCG
GTGCTGCTGC GTTGCGTCGA GCATGCGCGC GCGGCCCGTG TTGATCTCGT GATTGGTCTG
GGTGGCGGCT CGTCGATGGA CATTGCAAAG CTGGCGGCCG TGCTGGCTGT CTCCGAGCAG
CCGCTGGCCG AGATGTACGG CATCGGAAAC GTCAAGGGCG CACGCGTGCC GCTGGTGCAG
ATGCCGACCA CGGCCGGTAC CGGTTCGGAA GTGACCAATA TCTCCATCGT GTCCGTCGGC
GAGACGACCA AGATGGGAAT CGTCGCGCCC CAGCTTTACG CAGACCGCGT GATCCTCGAC
GCCGAGCTGA CCGTCGGCCT GCCGCGGCAG CACACCGCGG CCACAGGGAT CGACGCCATG
GTTCACGCCA TCGAGGCTTA CACCAGCAAG CACAAGAAGA ACGCCATTTC CGACGCGCTG
GCGCGTGAGG CGCTGCGCCT GCTGTCGGCC AATCTGCTGG CTGCATGCGA GAACGGTAAC
GACCGGCGCG CGCGCGAGGC GATGCTGCTT GGCGCGACGC TCGCGGGCCA GGCTTTCGCC
AACGCGCCGG TTGCGGCCGT GCACGCGTTG GCGTATCCGC TGGGTGGGCA TTTCCATATC
CCGCACGGTC TGTCCAACGC GCTGATGCTT GGGCCGGTGT TGCGCTTCAA CGCCGCAGCA
GCGGCTGCGC AGTACGCAGA ACTGGCGGGC GCGCTGGGCA TCGGCGAGGC AGATCGCGAT
GACGATGCCC GCACCGCTGC CTTCATTGCA TTCATGGAGG ACCTGATGGA TCGGTCCGGT
GCGCCGCGGC GGCTGCGCGA TGCAGGTGTC ACGCGCGAAA GCCTGGCGAT GCTTGCCGCG
GACGCCATGC AGCAGCAGCG CTTACTACAG AACAACCCGA TCGACGTGCA GCAAGCCGAC
GCCCTGCGGC TCTACGAACA GGCGTACTAA
 
Protein sequence
MDQFQQPVRF DTVPSILQEW GAARRLGELL AAWTERRSVL VVTDGGLHKA GVLESAKASL 
ATAGFRVTVF DEVVADPPEA VLLRCVEHAR AARVDLVIGL GGGSSMDIAK LAAVLAVSEQ
PLAEMYGIGN VKGARVPLVQ MPTTAGTGSE VTNISIVSVG ETTKMGIVAP QLYADRVILD
AELTVGLPRQ HTAATGIDAM VHAIEAYTSK HKKNAISDAL AREALRLLSA NLLAACENGN
DRRAREAMLL GATLAGQAFA NAPVAAVHAL AYPLGGHFHI PHGLSNALML GPVLRFNAAA
AAAQYAELAG ALGIGEADRD DDARTAAFIA FMEDLMDRSG APRRLRDAGV TRESLAMLAA
DAMQQQRLLQ NNPIDVQQAD ALRLYEQAY