| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4376 |
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| Symbol | |
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| ID | 8022064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1001645 |
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| End bp | 1003765 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833151 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002984291 |
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| Protein GI | 241665932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0886158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGA AACGTTTGTG CCTGTCTCTG GCCGTCCTTG GAACGCTGCC CTTTGCTCAA
GTGGCAAGTG CCGCCGACAC CGTTGCTGCA GCCGACGCTG GCACGTTGCC GACTTCCACG
GTCAAGGGTG CGCGCAGCAG CACGAGCTAC GACACGCCCA TCGCCAACAC AGCCACGAAG
ATTCCCGTGC CGCTGCGCGA GATTCCGCAA TCGGTGAACG TCGTGCCGCG TGCGGTGATC
CAGGATCAGG GCGCGCTGTC GATCAATGAC ACGCTGCGCA ACGTGCCGGG CGTGTCGGCC
TCGCTGGGCG ATGCGCAGCG CGATCAGGTG ACCATTCGCG GTTTCTCGTC GATCAATGAC
CAATACGTCG ACGGCCTGCG CGATGATTCG CTCTACTTCC GCGACCTGTC CAACATCGAC
CACATTGAAG TGTTGAAGGG CCCGGCGGCC GTGCTGTATG GGCGCGGTTC GTCCGGCGGC
ATCATCAATC GCGTGACCAA GAAACCGCTG GCCACGCCAC TGGCCGAGGT GGGCGTGGTG
GTCGGCACGG AGCGCCAGAA ACGCGCCGAG TTCGACCTGA ACACGTCCAT CAACGACGAC
GCCATCCGCG CGCGCATTAC CGGCGCGGTT GAAGATTCGG GTGGTTTCCG CAACGACTAC
TTCCTGCGCC GCCAGGCGAT CTCGCCGTCG TTCCTGTTCA ACCTGGCGCC CGATACCAAA
CTGACCGTGC AGTTCGATTA CCTGCACGAC AAGCGCATCG CTGACCAGGG CGTGCCGTCG
TACCACGGCC GCCCCGTGGA TGTGCCCATC GGCACGCGCT ATGGCTCGGC CGATGCGGGC
GCCGGCAATG TGGAGTCCAC CGTCAAGAGC GTGACCGGCA CGCTGGACCA TCGCTTCAAC
GACAAATGGT CGTTCCACAG CGTGGTGCGC AATTACGAAT ACTCGCTGGG CCGCAACAAC
TACACGACAG TCAGCCGCGT CACCGATGGG CCAATCCCGA CCGTCACGCT TGCCGTCAAC
CAGCGCAACC GCAGCGACCG CGGCACGCTG TGGCAGAACG AGCTGACGCA GAAGGCCGAG
ACCTGGGGCA TCCAACACAC GCTGCTGTAC GGCATCGAGC TGGGCTACCA GGACAAGAGC
GACCGTGTGG CCGCCGCGCC GGGCAGCACG ACCTACAACC TGTTCAACCC GACGCTGCAA
GTGTTGCCGA CCGTACCCGG CAACGCGGTG CCGACCAACT ACGGCCTCTC GCACAACGAG
ACGTATGCGG CGTACGTGCA GGACTTGATC AAGTTTTCGC CGCAATGGAC GGTGCTCGCC
GGCCTGCGCT ACGAAATCCT CAAGCAGAGC CGCGACGACC TGACCCCGCG CAATGTCGAT
CTGTCACGCA CGGACAAGCC GGTCAGCCCG CGCTTCGGCG TTGTGTATCA CCCGGTCGAG
CCGCTCTCAC TGTACGCGTC GTACAGCCGC TCGTTCCAGC CGCTGGCCGA TAGCTTCACG
TTCTTCCCGA ACAGCGGCGC ACTGGCTCCG CAATCGACCA CGAACTACGA GATCGGCGCC
AAGTACGACC TCTCGGCCGG CGCGAGTGTC ACGGCCGCGC TGTTCGACAT GAAGCAGACC
AACCTGACGG CGGCGGATCC GGTCACGCTG CTGGGCGTGC CCATCGGCAC CCAGCGCACG
CGCGGCCTGG AGTTGTCGTT CACTGGCGAG ATCGTGAAAA CCTGGTCGCT GATGGCGAGC
TATGCCTATC TGAACGGTCG CCTGGAAAAC CCGAACGACC GCAGCGGTGG CGTGGCGGTC
AACGGCAACC AGCCGTCGCT GACGCCGCGG CACAGCGGCT CGGTATGGCT GAAGCACGAC
CTGCCGAACG GCTTCTACGT GGCCGGCGGC GTGCGTGCGG AAGGTGCGCG TTACGCATCG
CAGTACAACC TGACGACGCT GCCCGGCTAC ATGACCGTCG ACCTGGGTGC CGGTTATCGC
AGCAAGCACC TTGATGTCAC GCTGAACCTG CAGAACCTGT TCAACCGCGC GTACTACGTG
TCGGCTCACG GCGCCGCCGA GAACTACAAC ATGCCCGGTG CCCCGCGCAT GGCGCTGCTG
GGCGTGCGCT ACAAGATGTA A
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| Protein sequence | MPPKRLCLSL AVLGTLPFAQ VASAADTVAA ADAGTLPTST VKGARSSTSY DTPIANTATK
IPVPLREIPQ SVNVVPRAVI QDQGALSIND TLRNVPGVSA SLGDAQRDQV TIRGFSSIND
QYVDGLRDDS LYFRDLSNID HIEVLKGPAA VLYGRGSSGG IINRVTKKPL ATPLAEVGVV
VGTERQKRAE FDLNTSINDD AIRARITGAV EDSGGFRNDY FLRRQAISPS FLFNLAPDTK
LTVQFDYLHD KRIADQGVPS YHGRPVDVPI GTRYGSADAG AGNVESTVKS VTGTLDHRFN
DKWSFHSVVR NYEYSLGRNN YTTVSRVTDG PIPTVTLAVN QRNRSDRGTL WQNELTQKAE
TWGIQHTLLY GIELGYQDKS DRVAAAPGST TYNLFNPTLQ VLPTVPGNAV PTNYGLSHNE
TYAAYVQDLI KFSPQWTVLA GLRYEILKQS RDDLTPRNVD LSRTDKPVSP RFGVVYHPVE
PLSLYASYSR SFQPLADSFT FFPNSGALAP QSTTNYEIGA KYDLSAGASV TAALFDMKQT
NLTAADPVTL LGVPIGTQRT RGLELSFTGE IVKTWSLMAS YAYLNGRLEN PNDRSGGVAV
NGNQPSLTPR HSGSVWLKHD LPNGFYVAGG VRAEGARYAS QYNLTTLPGY MTVDLGAGYR
SKHLDVTLNL QNLFNRAYYV SAHGAAENYN MPGAPRMALL GVRYKM
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