Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4350 |
Symbol | |
ID | 8022038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 971735 |
End bp | 972988 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833125 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002984265 |
Protein GI | 241665906 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.626304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGTT TTTCCAAAGA GTTGCCGATT ACCACAGAAG TCGCGCAGAA CAACAATAAT CATGACAGCG ACGGCGGCAT CACGCCGCAA CACGCCGACA GCAAGGGATT GCACTCTGAG CTGTCGCAAT ACGCACCGGG GGCCATCATG CTGCAACGTC TATCGGATGA CGCAGAATTC CATCGACTCG TCGATACCAT CTACGAGGCG GTACTCGAGC CTGCGCAGAT GCCGATCGCC CTGGCCCTGC TTTCTGTGTA TGCCGGCGCC GAAAGCGCAC ACTATTTCGT CTGGGACAAG CACACCGACA CGCCGCGCCA CGGCGTTTCG TCGGGCTGGT GCCAGCACTG CCCGCAGCCG GGCCACTGCA ACAGCTTCTG TCACGATCCG CAACTGCTGA GCGCCGCGCC GCCCGAAGAG ACGCCTTCGG CAGGCATGAC ACTGATCGAT ACGCCCGACA TGCGCGTCAC GATGCGCCTG CGCACGCGCG ACGACGATGC ATCGGAAGTC AGCACCATCG AACGCGAAAC CCGCCTGCAG CGCGTGCTGC CGCACCTGCA GCGGGCTGCG CGCATGCAGC AGCGCAATCT TGAGCTGAAC GAACTCGCCG CACTCGGCAT GGCCGGGCTG GATACGCTCG ACTTCGGCGT GATGGTCATC GAGCGCACCA TGCGCGTGAA ATACGCCAAC GCCTGGGCGC GCACGATGAC GACGGAAGAC GACCGCTTGT CGCTCGATGG CAGCCTGTTG CATTCGGCTG ATCACACACA CGACGCGGCG CTTCGCAACC TCATCGAACA TGCTGCCGGG TCACTCGGCG TACAAGGCGC GGCCGGTTCG TGGATGTACC TGGCGCGCGA TGGCCGCCCG GTACCGTTCA TTGCCACGCC GCTCACGCCT TCCGATGCGA TGCGTTCGGC CTGGGCCTCG CCGCTGGCGC TGGTGCTCGT CGGCAACTCC GAGGCACGGT CCGTCATGGA CGCCGGCGTG CTCGCCTCGC TCTTCGGGCT GACCAACAAG GAATGCATCG TCGCTGCACG GCTGGCCGCA GGCGAAACCC TGCAGGAAAT TGCCGAGCGC GAATTTCTCT CGCTGCACAC GGTGCGCGTG CATATCCGCG ACATCCTGCG CAAGACCGGC ACGCATCGCC AGTCTGAGCT TGTGCGCCTG CTGCATCTGT TGCCCAGCGT CGATCTGGAA CGTGCTGGCG CTGCCACTCC GGCTGCGCGC CGGCGGGGCC GCCTCAACGC CTGA
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Protein sequence | MLSFSKELPI TTEVAQNNNN HDSDGGITPQ HADSKGLHSE LSQYAPGAIM LQRLSDDAEF HRLVDTIYEA VLEPAQMPIA LALLSVYAGA ESAHYFVWDK HTDTPRHGVS SGWCQHCPQP GHCNSFCHDP QLLSAAPPEE TPSAGMTLID TPDMRVTMRL RTRDDDASEV STIERETRLQ RVLPHLQRAA RMQQRNLELN ELAALGMAGL DTLDFGVMVI ERTMRVKYAN AWARTMTTED DRLSLDGSLL HSADHTHDAA LRNLIEHAAG SLGVQGAAGS WMYLARDGRP VPFIATPLTP SDAMRSAWAS PLALVLVGNS EARSVMDAGV LASLFGLTNK ECIVAARLAA GETLQEIAER EFLSLHTVRV HIRDILRKTG THRQSELVRL LHLLPSVDLE RAGAATPAAR RRGRLNA
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