| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4340 |
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| Symbol | |
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| ID | 8022028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 958298 |
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| End bp | 959728 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833115 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_002984255 |
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| Protein GI | 241665896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.196196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC TCATTGTGGT TTCCAACCGC GTTGCGCCCG TTGCCGAAGG CCAGGGAACG
GCCGGCGGCC TGGCCGTGGG TGTGTTCGAT GCGCTGCGCG AAACCGGCGG CATCTGGTTT
GGCTGGAGCG GCGAAAGCGC AGCCACTGTT TCACACGAGC CGACCATCGT CACCAAGGGC
AATATCACCT ATGCCACCGT CGGCCTGAAC CGCAAGGACT ACGACCAGTA CTACCGCGGT
TTTGCCAACG CGACGCTGTG GCCAATCTTC CATTACCGCG TGGATCTGTC GCGCTACGAG
CGCCAGGAGT ACCACGGTTA CCGGCGCGTC AATGCGCAGT TTGCGCATCA GCTCAAGGCG
CTGGTGCAAC CCGACGACAT CCTTTGGGTG CACGACTATC ACCTGATCCC GTTTGCCGCA
GAGTGCCGCG CGCTGGGGCT GACCAACCGC ATCGGGTTCT TCCTGCATAT TCCGTTTCCG
TCGCCGGAAA TCCTGACGAC GATTCCGCCG CATGAAGACC TCATGCGCGC GCTGTGTGCG
TACGACCTGG TCGGTTTCCA GACAGAGACC GACCGCGTGG CCTTCTACGA CTACATCGAG
CGCGAGGCGC GCGGCTACAT CGAGCAGAAA GAGCAGAACG GCCCGGTACA CGCCTATGGC
CACACGCTGC GCGCGGAGGT CTACCCGATC GGCGTGCATC CGGACGAGAT CGCGCAGCAA
GCCAAGGCGT CGCTGGCACG GCGCAATCCG TTCATGCGGC ATGCGGGCGC GCGCGGCGAG
CGCATTGCGC CGCAGGGGCA AGGCCAAGGC CAGCCGCCCA CGAAACTCAT CATGAGCGTC
GATCGGCTCG ACTATTCCAA AGGCCTGCCC GAGCGCTTCC GCGCGTTCGA GCAATTGCTG
GACGATTTTC CGGACCATCG CCGGCACGTG ACCTTCATCC AGATTGCGCC CACGTCGCGC
CAGGACGTGC AGAGCTATCA GCAGATCCGG CAGCGGCTGG AGGCTGAATC GGGCCGCATC
AACGGCAAGC ATTCGGAACT GGACTGGACG CCCATCCGCT ACATCAACAA GCAGTACGAA
CGGCGCGTGC TGATGGCGCT TTTCCGCAGC TCGCAGATCG GTTATGTCAC GCCTCTGCGT
GACGGCATGA ACCTCGTCGC CAAGGAATAC GTGGCCGCAC AAGACCCGGA AAACCCGGGC
GTGCTCGTGC TGTCGCGCTT TGCCGGCGCG GCGCGCGAGT TGGATGCCGC ACTGATCGTC
AACCCGTATG ACACGCGCGG CATGGCCGAG GCACTGAACC GCGCGTTGAC GATGCCGCTC
GAAGAACGCA AGGCGCGCTA TGCCCACATG ATGGATCGGC TGCGGTCGGC CAACCTCACC
ATCTGGCGCG AGCGGTTCGT GACAGACCTG CGCGGCGCGC CGTCGCGATA G
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| Protein sequence | MSRLIVVSNR VAPVAEGQGT AGGLAVGVFD ALRETGGIWF GWSGESAATV SHEPTIVTKG
NITYATVGLN RKDYDQYYRG FANATLWPIF HYRVDLSRYE RQEYHGYRRV NAQFAHQLKA
LVQPDDILWV HDYHLIPFAA ECRALGLTNR IGFFLHIPFP SPEILTTIPP HEDLMRALCA
YDLVGFQTET DRVAFYDYIE REARGYIEQK EQNGPVHAYG HTLRAEVYPI GVHPDEIAQQ
AKASLARRNP FMRHAGARGE RIAPQGQGQG QPPTKLIMSV DRLDYSKGLP ERFRAFEQLL
DDFPDHRRHV TFIQIAPTSR QDVQSYQQIR QRLEAESGRI NGKHSELDWT PIRYINKQYE
RRVLMALFRS SQIGYVTPLR DGMNLVAKEY VAAQDPENPG VLVLSRFAGA ARELDAALIV
NPYDTRGMAE ALNRALTMPL EERKARYAHM MDRLRSANLT IWRERFVTDL RGAPSR
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