Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4340 |
Symbol | |
ID | 8022028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 958298 |
End bp | 959728 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833115 |
Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_002984255 |
Protein GI | 241665896 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.196196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC TCATTGTGGT TTCCAACCGC GTTGCGCCCG TTGCCGAAGG CCAGGGAACG GCCGGCGGCC TGGCCGTGGG TGTGTTCGAT GCGCTGCGCG AAACCGGCGG CATCTGGTTT GGCTGGAGCG GCGAAAGCGC AGCCACTGTT TCACACGAGC CGACCATCGT CACCAAGGGC AATATCACCT ATGCCACCGT CGGCCTGAAC CGCAAGGACT ACGACCAGTA CTACCGCGGT TTTGCCAACG CGACGCTGTG GCCAATCTTC CATTACCGCG TGGATCTGTC GCGCTACGAG CGCCAGGAGT ACCACGGTTA CCGGCGCGTC AATGCGCAGT TTGCGCATCA GCTCAAGGCG CTGGTGCAAC CCGACGACAT CCTTTGGGTG CACGACTATC ACCTGATCCC GTTTGCCGCA GAGTGCCGCG CGCTGGGGCT GACCAACCGC ATCGGGTTCT TCCTGCATAT TCCGTTTCCG TCGCCGGAAA TCCTGACGAC GATTCCGCCG CATGAAGACC TCATGCGCGC GCTGTGTGCG TACGACCTGG TCGGTTTCCA GACAGAGACC GACCGCGTGG CCTTCTACGA CTACATCGAG CGCGAGGCGC GCGGCTACAT CGAGCAGAAA GAGCAGAACG GCCCGGTACA CGCCTATGGC CACACGCTGC GCGCGGAGGT CTACCCGATC GGCGTGCATC CGGACGAGAT CGCGCAGCAA GCCAAGGCGT CGCTGGCACG GCGCAATCCG TTCATGCGGC ATGCGGGCGC GCGCGGCGAG CGCATTGCGC CGCAGGGGCA AGGCCAAGGC CAGCCGCCCA CGAAACTCAT CATGAGCGTC GATCGGCTCG ACTATTCCAA AGGCCTGCCC GAGCGCTTCC GCGCGTTCGA GCAATTGCTG GACGATTTTC CGGACCATCG CCGGCACGTG ACCTTCATCC AGATTGCGCC CACGTCGCGC CAGGACGTGC AGAGCTATCA GCAGATCCGG CAGCGGCTGG AGGCTGAATC GGGCCGCATC AACGGCAAGC ATTCGGAACT GGACTGGACG CCCATCCGCT ACATCAACAA GCAGTACGAA CGGCGCGTGC TGATGGCGCT TTTCCGCAGC TCGCAGATCG GTTATGTCAC GCCTCTGCGT GACGGCATGA ACCTCGTCGC CAAGGAATAC GTGGCCGCAC AAGACCCGGA AAACCCGGGC GTGCTCGTGC TGTCGCGCTT TGCCGGCGCG GCGCGCGAGT TGGATGCCGC ACTGATCGTC AACCCGTATG ACACGCGCGG CATGGCCGAG GCACTGAACC GCGCGTTGAC GATGCCGCTC GAAGAACGCA AGGCGCGCTA TGCCCACATG ATGGATCGGC TGCGGTCGGC CAACCTCACC ATCTGGCGCG AGCGGTTCGT GACAGACCTG CGCGGCGCGC CGTCGCGATA G
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Protein sequence | MSRLIVVSNR VAPVAEGQGT AGGLAVGVFD ALRETGGIWF GWSGESAATV SHEPTIVTKG NITYATVGLN RKDYDQYYRG FANATLWPIF HYRVDLSRYE RQEYHGYRRV NAQFAHQLKA LVQPDDILWV HDYHLIPFAA ECRALGLTNR IGFFLHIPFP SPEILTTIPP HEDLMRALCA YDLVGFQTET DRVAFYDYIE REARGYIEQK EQNGPVHAYG HTLRAEVYPI GVHPDEIAQQ AKASLARRNP FMRHAGARGE RIAPQGQGQG QPPTKLIMSV DRLDYSKGLP ERFRAFEQLL DDFPDHRRHV TFIQIAPTSR QDVQSYQQIR QRLEAESGRI NGKHSELDWT PIRYINKQYE RRVLMALFRS SQIGYVTPLR DGMNLVAKEY VAAQDPENPG VLVLSRFAGA ARELDAALIV NPYDTRGMAE ALNRALTMPL EERKARYAHM MDRLRSANLT IWRERFVTDL RGAPSR
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