| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4279 |
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| Symbol | |
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| ID | 8021967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 879640 |
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| End bp | 882387 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833054 |
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| Product | Nitrate reductase |
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| Protein accession | YP_002984194 |
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| Protein GI | 241665835 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.49754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA TCCCCATTCA CCCAGTAACG GACGCCGTGC GCACCACCTG CCCATACTGC
GGCGTCGGCT GCGGCGTGCT CGCGACCCCG CAAGCGGATG GCAGTGTCAG CATTCAAGGC
GATCCGACGC ACCCAGCCAA CGCAGGGCGC CTGTGCGTAA AGGGCTCCGC GCTGGGCGAG
ACCGTGAGCC TGGACGGCCG GTTGCTTTAC CCGGCCATGC GCGAGCGCTC GCGTGACGTG
GACGCTCCGG AGTTCACCAA GCCGGCGCCA TTACAGCGCG TCTCGTGGGA CACCGCGCTC
GACGCCGTCG CGCAAGGCTT TCGCCGCATC GCCGAAGAGC ACGGTCCGGA TTCCGTCGCG
CTCTACGTTT CCGGCCAGTT GCTGACCGAG GACTACTACG TCGCCAACAA GCTGATGAAG
GGCTTCATCG GCACCGCCAA CATCGATACG AACTCTCGAC TATGCATGTC GTCGGCCGTG
GCGGGGCATA AGCGCGCGTT TGGCGAAGAC CTCGTGCCCG TCTGCTATGA CGATCTGGAA
ACGGCGGACC TCATCGTGCT GGTGGGCTCG AACACGGCGT GGTGTCACCC GATCCTGTTC
CAGCGCATCA TGCGCGCCAA GGAAGCGCGG CCCGAGATGA AAGTGGTGGT GGTTGACCCG
CGCCACACGG CCACCTGCGA GCTGGCCGAT CTGCATCTGC CCATCAAGCC CGGCACCGAT
GTGTCGCTGT TCAACGGCCT GCTGTCGTTT CTCTCGCGGC GCGGCGTGGT CGACAGGAAC
TTCGTCACGC TGCACACCAA CGGCCCGGAC GCCGCGCTGG AAGCTGCCGG CACCGAGAGC
GACGACGTCG AAGCCGTCGC CAAGGCCTGC AAGCTCAAGC TCGACGATCT GCTCACCTTC
TACAGCTGGT TTGCCGATAC CGAGCGCACC ATCACCGCCT TCTCGATGGG CGTCAATCAG
TCGACGGCGG GCACGGACAA GGTCAACAGC ATCATCAACT GCCACTTGCT CACCGGCCGC
ATCGGCCGCG CGGGCATGGG GCCGTTTTCG ATTACCGGAC AGCCGAATGC GATGGGTGGC
CGCGAAGTGG GCGGTCTGGC CAACATGCTG GCCGCGCATA TGGAGCTGAA TGATCCGTCG
CATCGCGACC TCGTGCAGAC GTTCTGGGCG TCGCCGCGCA TGGCCGACAA GATGGGCCTC
AAGGCGGTCG ACCTGTTCAA GGCCATTGAA GACGGGCGCG TCAAGGCCGT GTGGATCATG
GGCACCAACC CCGTGGTCAG CCTGCCCGAT GCGGACCAGG CGCGCCGCGC CCTGGCCAAG
TGCGAACTCG TCGTCGCTTC CGACATCGTT GAAGCCACCG ACACCACCGT GCTGGCCGAC
ATCCTGCTGC CCGCGCTCGG CTGGGGCGAG AAAGACGGCA CGGTGACGAA CTCCGAGCGC
CGCATCTCGC GCCAGCGCGC CTTTCTGCAG GCCCCCGGCG AGGCACGTGC GGACTGGGAC
ATCATCGCCG ACGTTGCACG CCGCATGGGT TACGACGGCT TTGACTTCAA GAGCCCGCGC
GATGTGTTCG ACGAGCACGC GCGCCTGTCC GCTTACGCCA ACGATGCGAG CGGCGTCCGC
CGCGCCTTCC ACCTCGGCGG CCTGGCCGGG CTCGACGCCG GGGCATACGA CGGCATGTCG
CCGGTGCAAT GGCCCGTCGC AACGTCGGGC AACGGCGAAG CGCGGCTCTT CAGCGATGGC
CGCTTCGCCC ACGCCGATGG TCGCGCGCGT TTCGTGCCGA CGCCTGCCCG TGCGCCCGCG
CATGCGGCAG ATGGTGAATA TCCGCTCATT CTCAACACCG GCCGCGTGCG CGACCAATGG
CACACCATGA CGCGCACCGG CCGCGCGCCC AGGCTGGCCG ATCACGTGCC CGAACCGTTC
GTCGATCTGC ACCCGCACGA TGCGCTGCTG GCCGGCGTGC GCGAAGGCGG CCTGGCGCGC
GTGTCGTCGC GCTGGGGCAG TGTGGTGGCG CGTGTGCGCA TGACGGGCGG TATCGCGCGC
GGCAGCGTGT TCGTACCGAT CCACTGGAAC GGCCAGTTTG CTTCCGATGC GCGCGTGGGT
GCGGTCGTCA ATCCGGTGGT CGACCCGGTG TCCGGCGAGC CGGAGTTCAA GCACACGCCG
GTGATGGTCG AGCCGTTTGA TGTGGCGTGG CACGGTTTTG TGCTCTCGCG GCGCGCACTG
GACACCGACG ATGCAACCTG GTGGACGCGG ATTCAGGGCA AGCAGTTCCT GCGCTATGAG
CTGGCCGGCC GCCAGCACCT TGGCTCCGTA CACGATTGGG CGCGCACGCT GCTCGGCGTG
ACTGACCCGC ACGCCGACTG GCTCGAATAC GAAGACGCGA CCGCGCGTGT CTACCGCGCC
GTGCACGTGG TGGACGATCG CATCGAAGCC TGCGTGTTTC TCTCACCGCG CCCGGATCTG
CCGTCGCGCA ACTGGCTGGC TGGCCTGTTC GCACAAGAGC GCCTGGAAGA CCTCGATCGT
GCGGGCGTGC TGCTTGGCCA GCCGATCGAA GCCGGCGTCG ACGTGGGGCC AACCGTTTGC
TCGTGCTTTG GCGTGGGCCG TAACACCATC TGCGATGCCA TCCGCACCAA GGGCCTGCAA
TCCACCGGCG AGATCACGGC CTGCCTGAAG GCGGGCGGCA ATTGCGGCTC GTGCGTGCCG
GAACTCAAGC GGTTGCTGGT GGAGGCGCGC GTTCAGCAGG CGGCATGA
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| Protein sequence | MTTIPIHPVT DAVRTTCPYC GVGCGVLATP QADGSVSIQG DPTHPANAGR LCVKGSALGE
TVSLDGRLLY PAMRERSRDV DAPEFTKPAP LQRVSWDTAL DAVAQGFRRI AEEHGPDSVA
LYVSGQLLTE DYYVANKLMK GFIGTANIDT NSRLCMSSAV AGHKRAFGED LVPVCYDDLE
TADLIVLVGS NTAWCHPILF QRIMRAKEAR PEMKVVVVDP RHTATCELAD LHLPIKPGTD
VSLFNGLLSF LSRRGVVDRN FVTLHTNGPD AALEAAGTES DDVEAVAKAC KLKLDDLLTF
YSWFADTERT ITAFSMGVNQ STAGTDKVNS IINCHLLTGR IGRAGMGPFS ITGQPNAMGG
REVGGLANML AAHMELNDPS HRDLVQTFWA SPRMADKMGL KAVDLFKAIE DGRVKAVWIM
GTNPVVSLPD ADQARRALAK CELVVASDIV EATDTTVLAD ILLPALGWGE KDGTVTNSER
RISRQRAFLQ APGEARADWD IIADVARRMG YDGFDFKSPR DVFDEHARLS AYANDASGVR
RAFHLGGLAG LDAGAYDGMS PVQWPVATSG NGEARLFSDG RFAHADGRAR FVPTPARAPA
HAADGEYPLI LNTGRVRDQW HTMTRTGRAP RLADHVPEPF VDLHPHDALL AGVREGGLAR
VSSRWGSVVA RVRMTGGIAR GSVFVPIHWN GQFASDARVG AVVNPVVDPV SGEPEFKHTP
VMVEPFDVAW HGFVLSRRAL DTDDATWWTR IQGKQFLRYE LAGRQHLGSV HDWARTLLGV
TDPHADWLEY EDATARVYRA VHVVDDRIEA CVFLSPRPDL PSRNWLAGLF AQERLEDLDR
AGVLLGQPIE AGVDVGPTVC SCFGVGRNTI CDAIRTKGLQ STGEITACLK AGGNCGSCVP
ELKRLLVEAR VQQAA
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