| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4276 |
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| Symbol | |
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| ID | 8021964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 875148 |
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| End bp | 877703 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833051 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_002984191 |
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| Protein GI | 241665832 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.160671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.522332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA AGATCGTCGT CATTGGCCAC GGAATGGTGG GCCACAAGTT TCTGGAAAGC
CTGCTGCATG CTCCGGGCCA TCACCTCCAG GTGACGGTGC TGTGCGAAGA GCCGCGCCCC
GCCTACGACC GCGTGCACCT GTCGGAATTC TTCACGGGCA AGACGGCGGA AGAGCTCTCG
CTCGTGGCGC CGGGCTTCTT TGACCGCGAC GACGTGGTGC TCAAGCTCAA CGCCCGCGCC
ACGGCCATCG ACATCACCGC CAAAACGGTG ACGGCCTCGA CCGGCGAGGT GCTGCCGTAC
GACAAGCTTG TCCTCGCTTC GGGCTCGTCG CCGTTCGTGC CGCCCGTACC GGGCCGCGAC
CGCAAGGACT GCTTCGTCTA TCGCACCATC GAAGACCTCG AAGCGATGGC CGAATGCGGC
CAGCGCGCCA AGACCGGCGT CGTGATCGGC GGCGGGCTGC TGGGGCTGGA ATGCGCCAAG
GCGCTGCGCG ACATGAACCT GCAAACGCAT GTGGTCGAGT TTGCCGGTCG CCTGATGGCG
ATGCAGGTGG ATGACGGCGG CGGCCGCATG CTGCGCCGGA AGATCGAAGA CCTCGGCGTG
ACCGTCCACA CGCAGAAGAA CACGTCGGAG ATCGTTGATG GCGAAACCGC GACGCACCGC
CTGAACTTTG CCGACGGCAC GCACCTGGAA GCGGACATGG TCGTCTTCTC GGCCGGCATC
CGCCCGCGCG ACGAACTGGC GCGCGCTTGC GGGCTGGAAG TGGGCGAGCG CGGCGGCATC
GTGATCGACT CCGAATGCCG TACCTCGGCG CCGGACGTCT ACGCGATTGG CGAATGCGCG
CTGTGGGGCG GCAAAATCTA CGGCCTGGTT GCGCCCGGCT ACGAGATGGC GCGCATCACC
GCCAAGCAGA TCCTGGCCGC CGACGATGCG TCGGAGTTCA GCGGCGCCGA CATGAGCACC
AAGCTCAAGC TGATGGGCGT GGATGTCGCC AGCCTGGGCG ATGCGCAGGG CGTGACGCCG
GGCAGCCGCA GCGTGCAGTT CACCGACGAG CGCAAGCAGA TCTACAAGAA GCTGGTGGTG
TCGGAAGACG GCAAGTACCT GCTGGGCGGC GTGCTGGTGG GCGATGCGGC GGAATACGGC
ACGCTGCTGC AGATGATGCT CAACCGCATC GAGCTGCCCG AGGCGCCGGA ATTCCTGATC
CTGCCGCAGG CCGATGGCAA TGCGCGCCCC GCATTGGGCG TGGATGCGCT GCCCGATAGC
GCGCAGATCT GTTCGTGCAA CGACGTATCG AAAGGCGCGC TGTGCCAGGC GGTGTGCGCC
GGCGCCACCA CCGTGGGCGC GCTCAAGGAT GCCACCAAGG CCGGCACCTC GTGTGGCGGA
TGTGTGCCGC TCATGACGCA GGTGATGAAA GCCGAGATGA AGAAGCAAGG CCTGGCCGTC
AACAACCACA TCTGCGAGCA CTTTCCGTAT TCGCGTCAGG AGCTGTATCA CCTGGTGCGC
GTGGGCCGCA TCCAGTCGTT CGAGGCGCTG CTGGAAGCGC ATGGCAGCGG CATGGGCTGC
GACATTTGCA AGCCCGCCGT CGCGAGCATC CTTGCTTCGT GCTGGAACGA CTTCGTCCTC
AAGAAAGAGC ACGCCAGCCT GCAGGATTCC AACGACTACT TTCTCGCCAA CATCCAGAAG
GACGGGACGT ACTCCGTGGT GCCGCGCATG CCCGGCGGCG AGGTGACGGC AGACGGCCTG
ATCGCCGTGG GCCAGGTCGC CAAGAAATAC GACCTGTACA CCAAGATCAC GGGCGGCCAG
CGTGTCGATC TGTTCGGGGC GCGGCTGGAG CAGTTGCCGC TGATCTGGGA AGAGCTGATC
GCGGCCGGCT TCGAGTCGGG TCACGCGTAC GGCAAATCGC TGCGCACGGT GAAGTCGTGC
GTGGGCTCGA CGTGGTGCCG CTATGGCGTG GGCGATTCAG TGGGTTTTGC GATTGCGCTG
GAGAACCGCT ACAAGGGCCT GCGCTCGCCG CACAAGATCA AGTTTGGCGT CTCCGGCTGC
ACGCGGGAAT GCGCCGAAGC GCAGGGCAAG GACGTCGGCA TCATCGCCAC CGAGAAAGGC
TGGAACCTGT ATGTGTGCGG CAACGGCGGC ATGAAACCCC GCCATGCCGA ACTGCTGGCG
GCCGACCTCG ATCAGGAAAC GCTCATCAAG TATGTCGACC GCTTCCTGAT GTTCTACGTG
CGCACGGCCG ACCGCCTGCA ACGCACCAGC ACATGGCGCG ACAACCTCGA AGGCGGTCTC
GACTATCTGA AGGATGTGGT GATCAACGAC AAGCTGGGCA TCGTGGCCGA ACTCGAAGCC
GAGATGCAGC ACGTGGTCGA TACCTACCAG GACGAATGGA AGACGGCCGT GACGAACCCT
GACGTGCGCA AGCGCTTCCG CCACTTCGTC AACAGCGAAG CCAAGGATGC GAATGTCGTC
TTCGTCGAGG AGCGTGGCCA GATCCGCCCT GCCACGGTCG AGGAGCGTGC CAAGACGCGG
CCCGTGCGCA TTCCTGTTGT TGCTGAGGCC GCTTGA
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| Protein sequence | MTMKIVVIGH GMVGHKFLES LLHAPGHHLQ VTVLCEEPRP AYDRVHLSEF FTGKTAEELS
LVAPGFFDRD DVVLKLNARA TAIDITAKTV TASTGEVLPY DKLVLASGSS PFVPPVPGRD
RKDCFVYRTI EDLEAMAECG QRAKTGVVIG GGLLGLECAK ALRDMNLQTH VVEFAGRLMA
MQVDDGGGRM LRRKIEDLGV TVHTQKNTSE IVDGETATHR LNFADGTHLE ADMVVFSAGI
RPRDELARAC GLEVGERGGI VIDSECRTSA PDVYAIGECA LWGGKIYGLV APGYEMARIT
AKQILAADDA SEFSGADMST KLKLMGVDVA SLGDAQGVTP GSRSVQFTDE RKQIYKKLVV
SEDGKYLLGG VLVGDAAEYG TLLQMMLNRI ELPEAPEFLI LPQADGNARP ALGVDALPDS
AQICSCNDVS KGALCQAVCA GATTVGALKD ATKAGTSCGG CVPLMTQVMK AEMKKQGLAV
NNHICEHFPY SRQELYHLVR VGRIQSFEAL LEAHGSGMGC DICKPAVASI LASCWNDFVL
KKEHASLQDS NDYFLANIQK DGTYSVVPRM PGGEVTADGL IAVGQVAKKY DLYTKITGGQ
RVDLFGARLE QLPLIWEELI AAGFESGHAY GKSLRTVKSC VGSTWCRYGV GDSVGFAIAL
ENRYKGLRSP HKIKFGVSGC TRECAEAQGK DVGIIATEKG WNLYVCGNGG MKPRHAELLA
ADLDQETLIK YVDRFLMFYV RTADRLQRTS TWRDNLEGGL DYLKDVVIND KLGIVAELEA
EMQHVVDTYQ DEWKTAVTNP DVRKRFRHFV NSEAKDANVV FVEERGQIRP ATVEERAKTR
PVRIPVVAEA A
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