Gene Rpic12D_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4239 
SymbolfumC 
ID8021927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp840036 
End bp841421 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content64% 
IMG OID644833017 
Productfumarate hydratase 
Protein accessionYP_002984157 
Protein GI241665798 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GTACCGAACG CGACACCTTT GGCCCCATTG AAGTCCCTGC CGACCACTTG 
TGGGGCGCAC AAACGCAACG CTCGCTGCAG AACTTCGACA TTGCAGGCGA CCGCATGCCC
CGCGAGCTGA TCGACGCGCT CGCCCGCATC AAACGTGCCA GCGCCACCGT CAACCAGCGG
CTCGGGCTGC TGTCCGCAGA CAAGGCCAAC GCCATCGTGG GCGCCGCCGA TGAAGTCATC
GCCGGCAAGC ACCCGAACGA ATTTCCGCTG GTGGTCTGGC AAACGGGTTC GGGCACGCAG
ACCAACATGA ACATGAACGA GGTGCTCGCC AATCGCGCCA GCGAGCTGCT CGGCGGGGAA
CGCGGAGAAG CACGCCTCGT GCATCCGAAC GATGATGTGA ACCGCAGCCA GTCGTCCAAC
GATGTGTTCC CGACCGCGAT GCACGTGGCT GCCGTAACGG CCATCACGCA CCATCTGATT
CCATCGCTGC GCACGCTGCG GGAGACCCTC GCCAAGAAAG CTGCCGACTT CAACGACATC
ATCAAGATCG GCCGTACGCA CCTGCAGGAT GCGACGCCGC TCACGCTGGG CCAGGAGTTC
TCCGGCTACG TTGCACAGTT GCAGCACAAC GAAACGCACC TGAACGCCGC CCTGCCACAC
CTGTGCGAAC TCGCGCTGGG TGGCACGGCG GTCGGCACCG GCCTCAACGC ACCGGCCGGT
TATGCTGAAC AGGTGGCCGA AGAGCTGGCG CAACTGACCG GCCTGCCTTT CATCACCTCG
CCGAACAAGT TCGAGACCAT GGCGTCGGCC GATGGCCTTG TGCATGCGCA CGGCGCGCTG
AAAACGCTGG CAGCCAGCCT CACCAAGATC GCCAACGACA TCCGTTGGCT GGCCAGTGGA
CCACGCAGCG GGCTGGGAGA AATCTCTATC CCTGAGAACG AGCCGGGCTC GTCGATCATG
CCCGGCAAGG TCAACCCCAC GCAGAGCGAA GCGGTGACGA TGCTGTGTGC GCAGGTCTAC
GGTAACGACG TCGCAGTGAA CGTGGGCGGT GCGTCGGGCA ACTTCGAGCT GAACGTGTTC
CGCCCGATGA TTGCCTACAA CTTCCTGCAC AGCGTGCGCC TGCTGGCCGA CGGCATGCGC
AGCTTCAACG ATCACTGCGC CGCGGGTATC GAGCCGAACC GCGACCGTAT CGACGAGCTG
GTACAACGCT CGCTGATGCT GGTGACAGCG CTCAACCCGC ATATTGGCTA CGACAAATCG
GCGCAGATCG CCAAGAAGGC GCACAAGGAA GGCACCAGCC TGCGCGAGGC CGCGCTGGCG
CTTGGCTATG TCACCTCCGA GCAGTTCGAT GCGTGGGTGC GGCCGGAGAA CATGGTTGGC
CGCTAA
 
Protein sequence
MTTRTERDTF GPIEVPADHL WGAQTQRSLQ NFDIAGDRMP RELIDALARI KRASATVNQR 
LGLLSADKAN AIVGAADEVI AGKHPNEFPL VVWQTGSGTQ TNMNMNEVLA NRASELLGGE
RGEARLVHPN DDVNRSQSSN DVFPTAMHVA AVTAITHHLI PSLRTLRETL AKKAADFNDI
IKIGRTHLQD ATPLTLGQEF SGYVAQLQHN ETHLNAALPH LCELALGGTA VGTGLNAPAG
YAEQVAEELA QLTGLPFITS PNKFETMASA DGLVHAHGAL KTLAASLTKI ANDIRWLASG
PRSGLGEISI PENEPGSSIM PGKVNPTQSE AVTMLCAQVY GNDVAVNVGG ASGNFELNVF
RPMIAYNFLH SVRLLADGMR SFNDHCAAGI EPNRDRIDEL VQRSLMLVTA LNPHIGYDKS
AQIAKKAHKE GTSLREAALA LGYVTSEQFD AWVRPENMVG R