Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4239 |
Symbol | fumC |
ID | 8021927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 840036 |
End bp | 841421 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833017 |
Product | fumarate hydratase |
Protein accession | YP_002984157 |
Protein GI | 241665798 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC GTACCGAACG CGACACCTTT GGCCCCATTG AAGTCCCTGC CGACCACTTG TGGGGCGCAC AAACGCAACG CTCGCTGCAG AACTTCGACA TTGCAGGCGA CCGCATGCCC CGCGAGCTGA TCGACGCGCT CGCCCGCATC AAACGTGCCA GCGCCACCGT CAACCAGCGG CTCGGGCTGC TGTCCGCAGA CAAGGCCAAC GCCATCGTGG GCGCCGCCGA TGAAGTCATC GCCGGCAAGC ACCCGAACGA ATTTCCGCTG GTGGTCTGGC AAACGGGTTC GGGCACGCAG ACCAACATGA ACATGAACGA GGTGCTCGCC AATCGCGCCA GCGAGCTGCT CGGCGGGGAA CGCGGAGAAG CACGCCTCGT GCATCCGAAC GATGATGTGA ACCGCAGCCA GTCGTCCAAC GATGTGTTCC CGACCGCGAT GCACGTGGCT GCCGTAACGG CCATCACGCA CCATCTGATT CCATCGCTGC GCACGCTGCG GGAGACCCTC GCCAAGAAAG CTGCCGACTT CAACGACATC ATCAAGATCG GCCGTACGCA CCTGCAGGAT GCGACGCCGC TCACGCTGGG CCAGGAGTTC TCCGGCTACG TTGCACAGTT GCAGCACAAC GAAACGCACC TGAACGCCGC CCTGCCACAC CTGTGCGAAC TCGCGCTGGG TGGCACGGCG GTCGGCACCG GCCTCAACGC ACCGGCCGGT TATGCTGAAC AGGTGGCCGA AGAGCTGGCG CAACTGACCG GCCTGCCTTT CATCACCTCG CCGAACAAGT TCGAGACCAT GGCGTCGGCC GATGGCCTTG TGCATGCGCA CGGCGCGCTG AAAACGCTGG CAGCCAGCCT CACCAAGATC GCCAACGACA TCCGTTGGCT GGCCAGTGGA CCACGCAGCG GGCTGGGAGA AATCTCTATC CCTGAGAACG AGCCGGGCTC GTCGATCATG CCCGGCAAGG TCAACCCCAC GCAGAGCGAA GCGGTGACGA TGCTGTGTGC GCAGGTCTAC GGTAACGACG TCGCAGTGAA CGTGGGCGGT GCGTCGGGCA ACTTCGAGCT GAACGTGTTC CGCCCGATGA TTGCCTACAA CTTCCTGCAC AGCGTGCGCC TGCTGGCCGA CGGCATGCGC AGCTTCAACG ATCACTGCGC CGCGGGTATC GAGCCGAACC GCGACCGTAT CGACGAGCTG GTACAACGCT CGCTGATGCT GGTGACAGCG CTCAACCCGC ATATTGGCTA CGACAAATCG GCGCAGATCG CCAAGAAGGC GCACAAGGAA GGCACCAGCC TGCGCGAGGC CGCGCTGGCG CTTGGCTATG TCACCTCCGA GCAGTTCGAT GCGTGGGTGC GGCCGGAGAA CATGGTTGGC CGCTAA
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Protein sequence | MTTRTERDTF GPIEVPADHL WGAQTQRSLQ NFDIAGDRMP RELIDALARI KRASATVNQR LGLLSADKAN AIVGAADEVI AGKHPNEFPL VVWQTGSGTQ TNMNMNEVLA NRASELLGGE RGEARLVHPN DDVNRSQSSN DVFPTAMHVA AVTAITHHLI PSLRTLRETL AKKAADFNDI IKIGRTHLQD ATPLTLGQEF SGYVAQLQHN ETHLNAALPH LCELALGGTA VGTGLNAPAG YAEQVAEELA QLTGLPFITS PNKFETMASA DGLVHAHGAL KTLAASLTKI ANDIRWLASG PRSGLGEISI PENEPGSSIM PGKVNPTQSE AVTMLCAQVY GNDVAVNVGG ASGNFELNVF RPMIAYNFLH SVRLLADGMR SFNDHCAAGI EPNRDRIDEL VQRSLMLVTA LNPHIGYDKS AQIAKKAHKE GTSLREAALA LGYVTSEQFD AWVRPENMVG R
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