Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4190 |
Symbol | |
ID | 8021878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 796423 |
End bp | 797328 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832970 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002984110 |
Protein GI | 241665751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGC CGATCATTCC GGATTGCGTC TGGCGCGTCG GCGCAACGCT TGGGGAGGGC GCGGTGTGGC ACGCGGCATC GCGCTGCGTG GTCTTTGTCG ATATCCAGGG CAGGCGGCTC TACCGCTATG ACCCCGATAC CGATGTGCGC CGCAGCTGGG TCGCGCCAGG CCAGATCGGC TTTGCGCTGC CCAGCGTTGA CGGCAGCTGG ATCTGCGGCG TACCAGGCGG TCTCTATCGG TTCAGCTTCG AAACCGGCAC CTTCAGCCGC GTGTTGCCGG TCGAGACCGA CAGGCCGGGA AATCGGCTCA ATGATGGTTA TGTCGACCGC ACCGGCGCGC TGTGGTTTGG TTCGATGGAC GATGCGGAGC GCGAGCCGAG CGGGCAGCTC TACCGGGTAG GCGGGGATGG TGGCCTGAGC GTGCGCGATT CGGGCTACGT GATCACGAAT GGCCCGACCG CGAGCCCGGA CGGCCGCACG CTCTATCACA CCGATACCTT GCAGCGTGTG ATCTATGCCT TCGACCTCGG CGACGACGGC AGCCTGGAAC GCAAACGCAT CTTCACCTCG ATCGAGGGCA GCGGTTATCC AGACGGCATG GCCGTCGACG AGGAGGGGTG CCTGTGGGTC GCGCTGTTCG GCGGCGGGCG GATCGAGCGG TTCTCGCCCG ACGGCCGATG CATCGGGCGT GTCGACTTTC CCTGTTCCAA CATCACCAAG CTTGCGTTCG GCGGCGATGA CTTGCAGACG GTCTATGCAA CCACCGCCCG AAAGGGCCTG ACGGACGAGG CGTTGCAGAA GGAGCCGCTT GCCGGCGGCT TGTTCGCGTT TCGCGCGCCG GTCAGAGGGC TCCCGTCCAC GGATTGTGCT GTGGACTTTT CCGCAGCGGC GACAGGTCAG CCCTGA
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Protein sequence | MMAPIIPDCV WRVGATLGEG AVWHAASRCV VFVDIQGRRL YRYDPDTDVR RSWVAPGQIG FALPSVDGSW ICGVPGGLYR FSFETGTFSR VLPVETDRPG NRLNDGYVDR TGALWFGSMD DAEREPSGQL YRVGGDGGLS VRDSGYVITN GPTASPDGRT LYHTDTLQRV IYAFDLGDDG SLERKRIFTS IEGSGYPDGM AVDEEGCLWV ALFGGGRIER FSPDGRCIGR VDFPCSNITK LAFGGDDLQT VYATTARKGL TDEALQKEPL AGGLFAFRAP VRGLPSTDCA VDFSAAATGQ P
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