Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4125 |
Symbol | |
ID | 8021813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 724189 |
End bp | 724911 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832906 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002984046 |
Protein GI | 241665687 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCG ATCTCCGCCT GCCCCGCTAC CAGCAATTGC GCGACGATCT GGCCGCGCAG ATCGCCCAAC AGCACTGGCG CCCGGGCGAC GCCATCCCGA CCGAAGCCGA GCTTGCCAAG ACGTACAACG TGGCGGTCGG CACCGTCCGC AAAGCCGTAG ACGTACTGGT GGCCGAAGGG CTGCTCGAAC GCTTCCAGGG CCGTGGCACC TTTGTGCGGC GTGCCAGCTT TGCCAGTTCC TTGTTCCGCT TCTTCCGCTT CCAGAGTGAA AGCGGCGAGC GGCGCATTCC TGAGAGCCGC ATCCTCAAGC GGGACGTGCT GGATGCCCCG TCGGCACCGG CTGCAGGCCT GCAGATTGAA ACCGGCGCAC CGGTCATTCG CCTGACCCGG CTGCGCCTGC TGGATGGCGC ACCCATGCTG GCCGAAGAAA TCTGGTTGCC ATATGACCGT TTTGCGTCGC TCGCCACGCT GGAACTCAAC GCGTTTGGCG ACCTGCTGTA TCCGCTGTAC GAATCGCACT GCGGCCAGAT CATTGCGAGC GCCGAAGAAA CGCTCACCGC CGAAGCCGTC AACGCAACGT ATGCGCGCCT GTTGCGCATC CAGCCCGGCG ATCCGGTGAT GGTCATCGAA CGCGTTGCGC GCGGCTACGA CCGGGTGCCG CTCGAATGGC GGCGTTCGCG CGGCGCGGCG GCGCACTTCC GGTACCACGT GGATATCCGG TAA
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Protein sequence | MPADLRLPRY QQLRDDLAAQ IAQQHWRPGD AIPTEAELAK TYNVAVGTVR KAVDVLVAEG LLERFQGRGT FVRRASFASS LFRFFRFQSE SGERRIPESR ILKRDVLDAP SAPAAGLQIE TGAPVIRLTR LRLLDGAPML AEEIWLPYDR FASLATLELN AFGDLLYPLY ESHCGQIIAS AEETLTAEAV NATYARLLRI QPGDPVMVIE RVARGYDRVP LEWRRSRGAA AHFRYHVDIR
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