Gene Rpic12D_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4110 
Symbol 
ID8021798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp712426 
End bp713352 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID644832891 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002984031 
Protein GI241665672 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.180794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACGG ACGAAGAATT GGCACTCCTG GAGGCTATCC GCCAGACGGG CAGCCTGTCG 
CGCGCGGCGG CGCAACTGGG CAAGGCGCCG TCGACCGTGT CATATGCCGC ACGCCAACTG
GAGCAGCGCT TCGACGCCCT GCTGTTTGAT CGCCGTCGCT ACCGGCTGCA GCTCACGCGC
GCCGGGCAGT TGCTGACGGA AGAAGCCGCG CGGCTGGCGC AGGATGTGTC GCGTGTTACG
CAGCGCGTGC GGCAGGTGGC CAACGGCTGG GAAGACCGCT TGTGGATCGT GACGGACGAG
CTGCTGGAGT TCGAATCGCT CATGGCAGTG ATGCACGCGT TCGATGCGCT GCAATCGGGC
GTGGCGCTGC GCGTGACGCA CGAAGTGCTG GCCGGCACCT GGGAGGCCCT GCGCGACGGC
CGCGCCGATC TCGTGATCGG GGCGACCAAC GAGCCGCCTT CCATCCCGAA CCTCGGATGG
TTCGAGCTGG GGGTGGTGGA ATGGGTATTT GCCGTGTCGC CACGACACCC GCTTGCAGCC
GTCGACGCGC CGCTCACGCG CGAGGAAATC GCCCGGCATC GCGCCGTGGT GGTGGCCGAT
TCGGCGCGCA CCACCGCCGG CCGCGCCTAT GGGATGCTGA GCGGGCAGCC TACGCTGGCC
GTGCCCAGCA TGCGTGCCAA GACGCTTGCC CAGCGCGACG GCCTGGGCGT CGGCTGGCTG
CCGAGGCACC GCGTGGCGTC GCTGCTGGCG CGCGGCGAGC TGGTGGAAAA ACGTACCACC
GATCCGCGCG AGCCGAACCT GCTCTACGTC GGCTGGCGCA GCGGCGATGT CGACGGCGAG
GGCCGCGCAC TCCAATGGTG GCTTGAGCAG CTACGGCAGC CCCGCTTGGC CAGGCGGCTG
GTGCAGGGCA TCGACACATT CGCCTGA
 
Protein sequence
MLTDEELALL EAIRQTGSLS RAAAQLGKAP STVSYAARQL EQRFDALLFD RRRYRLQLTR 
AGQLLTEEAA RLAQDVSRVT QRVRQVANGW EDRLWIVTDE LLEFESLMAV MHAFDALQSG
VALRVTHEVL AGTWEALRDG RADLVIGATN EPPSIPNLGW FELGVVEWVF AVSPRHPLAA
VDAPLTREEI ARHRAVVVAD SARTTAGRAY GMLSGQPTLA VPSMRAKTLA QRDGLGVGWL
PRHRVASLLA RGELVEKRTT DPREPNLLYV GWRSGDVDGE GRALQWWLEQ LRQPRLARRL
VQGIDTFA