Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4085 |
Symbol | |
ID | 8021773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 678609 |
End bp | 679625 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832866 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002984006 |
Protein GI | 241665647 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.45247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGA AAAACAACGA GAAAGGAACC GTCTCTGTCA GCCTCGTCAA CGAGGCCGTG ACGCGCGCCC GCGCGCATGG CGTGGACATG CAGCCCATCA TGGCCGCTGC GGGCATCACG CCGCAGATGC TGGCGCAGCC GCGCAGCCGC GTGTCGTCCG CACAGTACGG TGCGCTGTGG GCCGGTATTG CGCAGGCCAT GGACGATGAG TTCTTCGGAC AGGATGCGCA CCCCATGCGC TGGGGCAGCT TCGTGACGAT GACGCAGGCG GCGCTCACGG CGCGCACCGG CCGGCAGGCG CTTGCACGGG CCACGGGTTT TTTGCGGCTG GTTCTGGATG ACCTGCATGT ACGCGTTGAA GAAGACGATC AGCGTGTGCG TCTCGTGTTC GTGCACCGCA AGGGCACGCG TGTGCCGCCC ATGTTCACCT ACGCCACGTG GCTCATCATG GTCTACGGGC TGGTGTGCTG GCTCGTGGGG CGGCGCATTC CCTTCATTGC CGCGCGCTTC CGGTGCGCCG CGCCGCAGGA TGCGCAGGAA TATCGCCTGA TGTTTTGCGA CGACATGGCG TTCAAGCACG ATGCGTCGTA CGTCGACCTA TCGCCCACCT TTCTCGACCT GCCGGTCATT CAGACGGCCG CGTCCATCAA GACGTTCCTG CGCGATGCGC CGGGCAGCTT CATCGTCAAG TACCGCAACC CGGATTCCTT CGCCGCGCGC GTGCGCAAGA CGCTGCGCAA TCTGCCCGTG GCCAGTTGGC CCGCGTCGGA CGCAATGGCG CTCAAACTGA ACGTGGCCGA GGCCACCATG CGGCGGCGCC TGAAGCTGGA AGGCCACACG TATCAGTCGA TCAAGGACGA CCTGCGGCGC GACATTGCCA TCGGCCAGTT GCAGGACACG CGCCGCACCA TCGCCGACAT TGCCGTCGCG GTCGGCTTTG CGGAACCGAG CGCCTTTCAC CGCGCCTTCC GCAAATGGAC AGGCATGCGG CCAACGGACT ATCGGACGGA GCGCTAG
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Protein sequence | MPMKNNEKGT VSVSLVNEAV TRARAHGVDM QPIMAAAGIT PQMLAQPRSR VSSAQYGALW AGIAQAMDDE FFGQDAHPMR WGSFVTMTQA ALTARTGRQA LARATGFLRL VLDDLHVRVE EDDQRVRLVF VHRKGTRVPP MFTYATWLIM VYGLVCWLVG RRIPFIAARF RCAAPQDAQE YRLMFCDDMA FKHDASYVDL SPTFLDLPVI QTAASIKTFL RDAPGSFIVK YRNPDSFAAR VRKTLRNLPV ASWPASDAMA LKLNVAEATM RRRLKLEGHT YQSIKDDLRR DIAIGQLQDT RRTIADIAVA VGFAEPSAFH RAFRKWTGMR PTDYRTER
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