Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4082 |
Symbol | |
ID | 8021770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 674309 |
End bp | 676876 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832863 |
Product | cyanophycin synthetase |
Protein accession | YP_002984003 |
Protein GI | 241665644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.88935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTCT CTCGTATCCG GGCCTTGCGC GGCCCAAATC TCTGGTGCCG CCATACGGCC ATCGAGGCCA TCGTGGCCTG CTCGGACCAA TCCCAACTGC TGGCCGAGCT GCCGGGCTTT GAAGACCGCC TGCGCGCGCG CTTTCCGGCG ATTGGCCCGA TGCGCCCCGA TGACGAAGCC GATGCGCCAT CGATTGCGCA CGCGCTGGAA GCCGCCGCGC TGGGCCTGCA AGCTGCCGCC GGTTGCCCGG TGACGTTCAG CCACACCGAG CCCACGCTCG AACCGGGCAC GTATCAGGTC GTCGTCGAAT ACACCGAAGA AGAAGTGGGC CGACTGGCAT TCGAGCTGGC CGGCCAACTT TGCCTGGCCG CCCGCGACGA CCAGCCGTTT GATCTGGACG ATGCACTGCA CCGCCTGCGC GAGCTGGACG AAGACGTACG CCTGGGGCCG AGCACCGGCT CCATCGTCGA CGCCGCCGTG GTGCGCGGCA TTCCGTATCG CCGCCTCACG CAGGGCTCGA TGGTGCAGTT TGGCTGGGGC AGCAAACAGC GCCGCATTCA GGCCGCCGAA ACCGACATGA CCAGCGCCGT GGCCGAATCG ATCGCGCAGG ACAAGGACCT CACGAAGGCC CTGCTGCATG CGGCCGGTGT GCCAGTGCCG CTGGGCCGTT CGGTGCGCAG CGCCGAGGAA GCCTGGGAAG CCGCGCAGGA AATCCACGGC CCGGTCGTGG TCAAGCCCCG CGACGGCAAC CAGGGCAAGG GCGTGGCCGT ACGCATCCGC ACGCGCGAAG AAGTGATGAC GGCGTACGAA GCGGCGGCCG ACATTTCTTC GGACGTGATC GTCGAGCGCT ACATCCCCGG CCATGACTTC CGTCTGCTCG TGGTGGGCAA GCACCTGGTG GCAGCTGCGC GCCGCGACCC GCCGCAAGTC ATCGGTGACG GCAAGCACAC CGTGCGCGAG CTGGTCGACG AAGTGAACCG CGACCCGCGC CGCGGCGAAG GACATGCCAC GTCGCTCACG AAAATCCGCT TCGACGACAT TGCACTGGCC ACGCTCGCCA AGCAGGGCCT GAGCGCCGAC GCCGTGCCGC CCAAGGGCAC GCGCGTGGTG TTGCGCAATA ACGCGAACCT TTCCACGGGC GGCACCGCCA CCGACGTGAC CGACGACGTG CACCCGGCTA TCGCGGCGCG TGCCGTCGCG GCCGCGCAGA TGGTCGGCCT CGACATCTGC GGGGTAGACG CCGTGTGCGA AACCATGCTC AAGCCGTTCG AGGACCAGGC CGGCGGCATC GTGGAAGTCA ACGCCGCACC GGGTTTGCGC ATGCACCTGC AGCCGTCGTA CGGCAAGGGC CGTGCCGTGG GCGAGGCGAT TGTCTCGACG ATGTTTGCGG ATGGCGACGA CGGCCGCATC CCCGTGGTGG CGGTGTCCGG CACCAACGGC AAGACGACGA CCGTGCGCCT GATTACCCAT CTGCTGGCGT CCAGTGGTCT GCGCATGGGC ATGACCGGCA CCGATGGCGT GTACATCCAG GGCCAGCGCA TCGACACCGG CGACTGCAGC GGCCCGCGCA GCGCGCGCAA CGTGCTGCTG CATCCGGATG TCGATGCCGC CGTCTTCGAA ACCGCGCGCG GCGGCCTGCT GCGCGAAGGT CTTGCGTTCG ACCGCTGCGA TGTGGCCGTG GTGACGAACG TGGGCGAAGG CGACCACCTG GGCCTGAACT ACATCAGCAC GGTGGAAGAC CTGGCCGTGC TCAAGAGCGT GATCGTGCAG AACGTGGCGC CGCGCGGCAT GGCGGTGCTC AACGCCGCCG ACCCGATGGT CGCGCGCATG GCGGAGGGCT GCCCTGGTTC GGTCACGTTC TTCGCGCACG ATCCGGGCCT GCCGACCCTG GCGCTGCACC GCGCGCAGGG CAAGCGCGTG GTGTTTGTCG ATGGCCCCGA GATCGTAGCC GCCGAAGGTG CCAACGAAAC GCGCATCGCA CTGGCCGACA TTCCGCTCAC GCGCAACGGC ACGATCGGAT TCCAGGTGGA AAACGCGATG TCGTCGATTG CGGCGGCATG GGCGCTTGGC ATCGACTGGA CGGTGATCCG CCGCGGGCTG GCGACGTTTG TGAACGACGC CGCAACCGCG CCGGGGCGCT TCAACCTGTT CGACTACAAG GGCGCCACGC TCATCGCCGA CTACGGCCAT AACCCGGATG CCATCCAGGC ACTGTGTAAC GCGGTAGCCA CCATGCCGGC GCAGCGTCGC ATGGTGGTGA TCAGCGGGGC CGGCGACCGC CGCGACGAAG ATATCCGCAA GCAGACGCAG ATTCTTGGCG GCGTGTTTGA CGATGTCGTG CTGTATGAAG ACCAATGCCA GCGCGGGCGC GCCGATGGTG AAGTGCTTGC GCTGCTGCGT GAAGGGTTGC AGGGTGCGTC ACGCACGAGC CGTGTTGATG AAATCCGTGG TGAATTTCTG GCTATCGACA CCGCGCTGGG GCGGTTGCAG CCGGGGGACC TCTGCCTGAT TTTGATTGAT CAGGTGGAGG AGGCATTGGA GCATATTGCT CGGCGGGTTG CTGAGTAG
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Protein sequence | MEVSRIRALR GPNLWCRHTA IEAIVACSDQ SQLLAELPGF EDRLRARFPA IGPMRPDDEA DAPSIAHALE AAALGLQAAA GCPVTFSHTE PTLEPGTYQV VVEYTEEEVG RLAFELAGQL CLAARDDQPF DLDDALHRLR ELDEDVRLGP STGSIVDAAV VRGIPYRRLT QGSMVQFGWG SKQRRIQAAE TDMTSAVAES IAQDKDLTKA LLHAAGVPVP LGRSVRSAEE AWEAAQEIHG PVVVKPRDGN QGKGVAVRIR TREEVMTAYE AAADISSDVI VERYIPGHDF RLLVVGKHLV AAARRDPPQV IGDGKHTVRE LVDEVNRDPR RGEGHATSLT KIRFDDIALA TLAKQGLSAD AVPPKGTRVV LRNNANLSTG GTATDVTDDV HPAIAARAVA AAQMVGLDIC GVDAVCETML KPFEDQAGGI VEVNAAPGLR MHLQPSYGKG RAVGEAIVST MFADGDDGRI PVVAVSGTNG KTTTVRLITH LLASSGLRMG MTGTDGVYIQ GQRIDTGDCS GPRSARNVLL HPDVDAAVFE TARGGLLREG LAFDRCDVAV VTNVGEGDHL GLNYISTVED LAVLKSVIVQ NVAPRGMAVL NAADPMVARM AEGCPGSVTF FAHDPGLPTL ALHRAQGKRV VFVDGPEIVA AEGANETRIA LADIPLTRNG TIGFQVENAM SSIAAAWALG IDWTVIRRGL ATFVNDAATA PGRFNLFDYK GATLIADYGH NPDAIQALCN AVATMPAQRR MVVISGAGDR RDEDIRKQTQ ILGGVFDDVV LYEDQCQRGR ADGEVLALLR EGLQGASRTS RVDEIRGEFL AIDTALGRLQ PGDLCLILID QVEEALEHIA RRVAE
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