Gene Rpic12D_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4082 
Symbol 
ID8021770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp674309 
End bp676876 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content67% 
IMG OID644832863 
Productcyanophycin synthetase 
Protein accessionYP_002984003 
Protein GI241665644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.88935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCT CTCGTATCCG GGCCTTGCGC GGCCCAAATC TCTGGTGCCG CCATACGGCC 
ATCGAGGCCA TCGTGGCCTG CTCGGACCAA TCCCAACTGC TGGCCGAGCT GCCGGGCTTT
GAAGACCGCC TGCGCGCGCG CTTTCCGGCG ATTGGCCCGA TGCGCCCCGA TGACGAAGCC
GATGCGCCAT CGATTGCGCA CGCGCTGGAA GCCGCCGCGC TGGGCCTGCA AGCTGCCGCC
GGTTGCCCGG TGACGTTCAG CCACACCGAG CCCACGCTCG AACCGGGCAC GTATCAGGTC
GTCGTCGAAT ACACCGAAGA AGAAGTGGGC CGACTGGCAT TCGAGCTGGC CGGCCAACTT
TGCCTGGCCG CCCGCGACGA CCAGCCGTTT GATCTGGACG ATGCACTGCA CCGCCTGCGC
GAGCTGGACG AAGACGTACG CCTGGGGCCG AGCACCGGCT CCATCGTCGA CGCCGCCGTG
GTGCGCGGCA TTCCGTATCG CCGCCTCACG CAGGGCTCGA TGGTGCAGTT TGGCTGGGGC
AGCAAACAGC GCCGCATTCA GGCCGCCGAA ACCGACATGA CCAGCGCCGT GGCCGAATCG
ATCGCGCAGG ACAAGGACCT CACGAAGGCC CTGCTGCATG CGGCCGGTGT GCCAGTGCCG
CTGGGCCGTT CGGTGCGCAG CGCCGAGGAA GCCTGGGAAG CCGCGCAGGA AATCCACGGC
CCGGTCGTGG TCAAGCCCCG CGACGGCAAC CAGGGCAAGG GCGTGGCCGT ACGCATCCGC
ACGCGCGAAG AAGTGATGAC GGCGTACGAA GCGGCGGCCG ACATTTCTTC GGACGTGATC
GTCGAGCGCT ACATCCCCGG CCATGACTTC CGTCTGCTCG TGGTGGGCAA GCACCTGGTG
GCAGCTGCGC GCCGCGACCC GCCGCAAGTC ATCGGTGACG GCAAGCACAC CGTGCGCGAG
CTGGTCGACG AAGTGAACCG CGACCCGCGC CGCGGCGAAG GACATGCCAC GTCGCTCACG
AAAATCCGCT TCGACGACAT TGCACTGGCC ACGCTCGCCA AGCAGGGCCT GAGCGCCGAC
GCCGTGCCGC CCAAGGGCAC GCGCGTGGTG TTGCGCAATA ACGCGAACCT TTCCACGGGC
GGCACCGCCA CCGACGTGAC CGACGACGTG CACCCGGCTA TCGCGGCGCG TGCCGTCGCG
GCCGCGCAGA TGGTCGGCCT CGACATCTGC GGGGTAGACG CCGTGTGCGA AACCATGCTC
AAGCCGTTCG AGGACCAGGC CGGCGGCATC GTGGAAGTCA ACGCCGCACC GGGTTTGCGC
ATGCACCTGC AGCCGTCGTA CGGCAAGGGC CGTGCCGTGG GCGAGGCGAT TGTCTCGACG
ATGTTTGCGG ATGGCGACGA CGGCCGCATC CCCGTGGTGG CGGTGTCCGG CACCAACGGC
AAGACGACGA CCGTGCGCCT GATTACCCAT CTGCTGGCGT CCAGTGGTCT GCGCATGGGC
ATGACCGGCA CCGATGGCGT GTACATCCAG GGCCAGCGCA TCGACACCGG CGACTGCAGC
GGCCCGCGCA GCGCGCGCAA CGTGCTGCTG CATCCGGATG TCGATGCCGC CGTCTTCGAA
ACCGCGCGCG GCGGCCTGCT GCGCGAAGGT CTTGCGTTCG ACCGCTGCGA TGTGGCCGTG
GTGACGAACG TGGGCGAAGG CGACCACCTG GGCCTGAACT ACATCAGCAC GGTGGAAGAC
CTGGCCGTGC TCAAGAGCGT GATCGTGCAG AACGTGGCGC CGCGCGGCAT GGCGGTGCTC
AACGCCGCCG ACCCGATGGT CGCGCGCATG GCGGAGGGCT GCCCTGGTTC GGTCACGTTC
TTCGCGCACG ATCCGGGCCT GCCGACCCTG GCGCTGCACC GCGCGCAGGG CAAGCGCGTG
GTGTTTGTCG ATGGCCCCGA GATCGTAGCC GCCGAAGGTG CCAACGAAAC GCGCATCGCA
CTGGCCGACA TTCCGCTCAC GCGCAACGGC ACGATCGGAT TCCAGGTGGA AAACGCGATG
TCGTCGATTG CGGCGGCATG GGCGCTTGGC ATCGACTGGA CGGTGATCCG CCGCGGGCTG
GCGACGTTTG TGAACGACGC CGCAACCGCG CCGGGGCGCT TCAACCTGTT CGACTACAAG
GGCGCCACGC TCATCGCCGA CTACGGCCAT AACCCGGATG CCATCCAGGC ACTGTGTAAC
GCGGTAGCCA CCATGCCGGC GCAGCGTCGC ATGGTGGTGA TCAGCGGGGC CGGCGACCGC
CGCGACGAAG ATATCCGCAA GCAGACGCAG ATTCTTGGCG GCGTGTTTGA CGATGTCGTG
CTGTATGAAG ACCAATGCCA GCGCGGGCGC GCCGATGGTG AAGTGCTTGC GCTGCTGCGT
GAAGGGTTGC AGGGTGCGTC ACGCACGAGC CGTGTTGATG AAATCCGTGG TGAATTTCTG
GCTATCGACA CCGCGCTGGG GCGGTTGCAG CCGGGGGACC TCTGCCTGAT TTTGATTGAT
CAGGTGGAGG AGGCATTGGA GCATATTGCT CGGCGGGTTG CTGAGTAG
 
Protein sequence
MEVSRIRALR GPNLWCRHTA IEAIVACSDQ SQLLAELPGF EDRLRARFPA IGPMRPDDEA 
DAPSIAHALE AAALGLQAAA GCPVTFSHTE PTLEPGTYQV VVEYTEEEVG RLAFELAGQL
CLAARDDQPF DLDDALHRLR ELDEDVRLGP STGSIVDAAV VRGIPYRRLT QGSMVQFGWG
SKQRRIQAAE TDMTSAVAES IAQDKDLTKA LLHAAGVPVP LGRSVRSAEE AWEAAQEIHG
PVVVKPRDGN QGKGVAVRIR TREEVMTAYE AAADISSDVI VERYIPGHDF RLLVVGKHLV
AAARRDPPQV IGDGKHTVRE LVDEVNRDPR RGEGHATSLT KIRFDDIALA TLAKQGLSAD
AVPPKGTRVV LRNNANLSTG GTATDVTDDV HPAIAARAVA AAQMVGLDIC GVDAVCETML
KPFEDQAGGI VEVNAAPGLR MHLQPSYGKG RAVGEAIVST MFADGDDGRI PVVAVSGTNG
KTTTVRLITH LLASSGLRMG MTGTDGVYIQ GQRIDTGDCS GPRSARNVLL HPDVDAAVFE
TARGGLLREG LAFDRCDVAV VTNVGEGDHL GLNYISTVED LAVLKSVIVQ NVAPRGMAVL
NAADPMVARM AEGCPGSVTF FAHDPGLPTL ALHRAQGKRV VFVDGPEIVA AEGANETRIA
LADIPLTRNG TIGFQVENAM SSIAAAWALG IDWTVIRRGL ATFVNDAATA PGRFNLFDYK
GATLIADYGH NPDAIQALCN AVATMPAQRR MVVISGAGDR RDEDIRKQTQ ILGGVFDDVV
LYEDQCQRGR ADGEVLALLR EGLQGASRTS RVDEIRGEFL AIDTALGRLQ PGDLCLILID
QVEEALEHIA RRVAE