Gene Rpic12D_4075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4075 
Symbol 
ID8021763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp664045 
End bp664860 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID644832856 
ProductBeta-lactamase 
Protein accessionYP_002983996 
Protein GI241665637 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.709144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCTC GCTGGTCGAA GACTTTCGCG TCCGCCCTCA CGGCCTGCGC CGTTGCGATG 
AGCACCACCA CCGCCCACGC CGAGCTGGTC GTGCGTAATG ACCTCAAGCG CGCGTTCGAC
GACGCGGGTG TCTCGGGCAC CTTTGTACTG ATGGACATCG GCGCCGACCG CACCTATGTC
GTCGATCCGG CGCGCGCCGC GCGGCGCATC CATCCGGCAT CGACGTTCAA GATTCCGAAC
AGCCTGATCG CCTTCGACAC CGGGGCCGTG CGCGACGATC AGGAAGTGCT GCCTTACGGC
GGCAAGCCGC AGCCTTACCA GCAGTGGGAG CACGACATGG CGTTGCCCGA GGCGATCCGC
CTGTCGGCCG TGCCGATATA CCAGGAGGTG GCACGGCGTG TCGGCCTTGA ACGCATGCAG
GCTTATGTGG ACGCTTTTGA GTACGGCAAT CGCCAGCTCG GCAGCGTGAT CGATCAATTC
TGGCTGCGTG GCCCGCTGGA GATTTCCGCA TTCGAAGAAG CGCGCTTCAC CAGCCGCATG
GCGCTCAAGC AGTTGCCGGT GAAGCCGCGC ACGTGGGACA TGGTCCAGCG CATGCTGTTG
ATCGAGCAGC AGGGCGATGC CGCGCTGTAT GCCAAGACCG GCGTCGCCAC CGAATACCAG
CCGGAGATCG GTTGGTGGGT CGGCTGGGTG GAGCGTGCCG GCCACGTGTA TGCCTTTGCT
CTGAACATCG ACATGCCGCG CGAGGGCGAT ATGGCCAAGC GAGTCCCGCT GGGCAAGCAG
TTGATGCAGG CGCTGGCGGT GTGGCCGGCA CCGTGA
 
Protein sequence
MFSRWSKTFA SALTACAVAM STTTAHAELV VRNDLKRAFD DAGVSGTFVL MDIGADRTYV 
VDPARAARRI HPASTFKIPN SLIAFDTGAV RDDQEVLPYG GKPQPYQQWE HDMALPEAIR
LSAVPIYQEV ARRVGLERMQ AYVDAFEYGN RQLGSVIDQF WLRGPLEISA FEEARFTSRM
ALKQLPVKPR TWDMVQRMLL IEQQGDAALY AKTGVATEYQ PEIGWWVGWV ERAGHVYAFA
LNIDMPREGD MAKRVPLGKQ LMQALAVWPA P