Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4075 |
Symbol | |
ID | 8021763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 664045 |
End bp | 664860 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832856 |
Product | Beta-lactamase |
Protein accession | YP_002983996 |
Protein GI | 241665637 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.709144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCTCTC GCTGGTCGAA GACTTTCGCG TCCGCCCTCA CGGCCTGCGC CGTTGCGATG AGCACCACCA CCGCCCACGC CGAGCTGGTC GTGCGTAATG ACCTCAAGCG CGCGTTCGAC GACGCGGGTG TCTCGGGCAC CTTTGTACTG ATGGACATCG GCGCCGACCG CACCTATGTC GTCGATCCGG CGCGCGCCGC GCGGCGCATC CATCCGGCAT CGACGTTCAA GATTCCGAAC AGCCTGATCG CCTTCGACAC CGGGGCCGTG CGCGACGATC AGGAAGTGCT GCCTTACGGC GGCAAGCCGC AGCCTTACCA GCAGTGGGAG CACGACATGG CGTTGCCCGA GGCGATCCGC CTGTCGGCCG TGCCGATATA CCAGGAGGTG GCACGGCGTG TCGGCCTTGA ACGCATGCAG GCTTATGTGG ACGCTTTTGA GTACGGCAAT CGCCAGCTCG GCAGCGTGAT CGATCAATTC TGGCTGCGTG GCCCGCTGGA GATTTCCGCA TTCGAAGAAG CGCGCTTCAC CAGCCGCATG GCGCTCAAGC AGTTGCCGGT GAAGCCGCGC ACGTGGGACA TGGTCCAGCG CATGCTGTTG ATCGAGCAGC AGGGCGATGC CGCGCTGTAT GCCAAGACCG GCGTCGCCAC CGAATACCAG CCGGAGATCG GTTGGTGGGT CGGCTGGGTG GAGCGTGCCG GCCACGTGTA TGCCTTTGCT CTGAACATCG ACATGCCGCG CGAGGGCGAT ATGGCCAAGC GAGTCCCGCT GGGCAAGCAG TTGATGCAGG CGCTGGCGGT GTGGCCGGCA CCGTGA
|
Protein sequence | MFSRWSKTFA SALTACAVAM STTTAHAELV VRNDLKRAFD DAGVSGTFVL MDIGADRTYV VDPARAARRI HPASTFKIPN SLIAFDTGAV RDDQEVLPYG GKPQPYQQWE HDMALPEAIR LSAVPIYQEV ARRVGLERMQ AYVDAFEYGN RQLGSVIDQF WLRGPLEISA FEEARFTSRM ALKQLPVKPR TWDMVQRMLL IEQQGDAALY AKTGVATEYQ PEIGWWVGWV ERAGHVYAFA LNIDMPREGD MAKRVPLGKQ LMQALAVWPA P
|
| |