| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4046 |
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| Symbol | |
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| ID | 8021734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 621821 |
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| End bp | 624643 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644832827 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_002983967 |
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| Protein GI | 241665608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.240234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC TGACCACACC CCCCGCACCC GTCACCCTCC AACGTGTGCC GCGCGCCACG
GTGCGGCTGC AACTGCACCG CGACTTTACG TTCGACCATG CGCGCGCGTT GCTGGATGAC
TTCGCCGCGC TCGGCATCTC GCACCTCTAC ACGTCGCCCA TCACCACGGC GCAACCGGGC
TCCACGCATG GCTATGACGT CGTCGACCCC ACACACGTGA ACCCCGAGCT GGGCGGCGAA
CGCGCGCTCG AACAGTTGGT GGATGCGCTG CATGCGCGCG GCATGGGGCT CGTCGTCGAT
ATCGTGCCAA ACCACATGGG CGTGGGGGGC GCGCACAACA CGTGGTGGTT GGACGTGCTC
GAATCCGGCC CCGAGAGCAC CTACGCCAAC TTCTTCGATA TCGACTGGCA ACCGCCCAAC
CCGGCCCTGC GCAACAAGGT GCTCGCGCCC TTCCTTGGCG AAAACTACGC CGACGCGCTG
GCCGGCGGCC GACTGCAGCT GACCTACGAC GACACGGCTG CGCGCCTGGC GATTGCGTAC
TACGATCACC GGTTCCCGAT TGCGCTGGCC GACTATGCCG CGTTGCTTCG CGCGGGCAAC
GCTGACACCG CCACCCACGC GGTGGCCGAC CGCTTTGCCG CGCTCGGCAC GATCCGCTCA
CTGCGCACGC GCCGCGAACG TGCCGACGAA GCACGCGACG CGCTGCGCAA CCTCGCCACC
ACGGAAGCCG GCGCCGCACA CATCGCAGAA GCCGTGCGCA CGCTCAATGC GCAACCCGAT
CAACTCGATG CGCTGATGGC GCGCCAGCAC TGGCGCCTTG CCCATTGGTG CACCGCCAAT
GATGAGATCA ACTGGCGCCG CTTCTTCGAT ATCGGCTCGC TGGCCGGCCT GCGCATGGAG
CGCGCCGAAG TCTTTGAAGC CACGCACGCG CTGCTGTTCC GGCTCTATCG CCTGGGCTGG
ATTGACGGCG TGCGCATCGA CCACGTTGAT GGCCTGGCCG ATCCTGCCGC CTACTGCCGC
CAGCTACGCC GCCGTCTGCA AGACGAGCAT GCCGCACGCC CCGCCGACCG GCTCACGAAC
CACCCGTGGA TCGTCGTCGA AAAGATCCTC GCCAGCGATG AACCCATGCG CACCGACTGG
GGCGTCGACG GCACCAGCGG CTACGACTTC ATGAACCAGG TGGGCGCACT GTTGCACGAC
GCGCACGGCG AGACCGCCCT CACCCAGGGC TGGCTGGAGT GGATCGGCGC ACCGGTGGCT
GACGCGCCGT TCTCCGCGAC GACTGCGCCC GCACGCCGCC AGATCCTGCA TGTGCACTTT
GCGGCGGAAC TCGATTCAGC CACGTCGGCG CTGCACGCGG TGGCGCAGCA GAACCACAGC
AGCCACGACG TGACGTGGCA CGCCATCCGC CGCGCACTGG CCGAGGTGAT CGTCCACTTT
CCGGTGTATC GCACCTATGC GAATGCGCAA CAACGCGACG CACAGGATTC GGCCATCCTG
CAAACCGCCA TGTCGCGGGC GGCGACCTGC CTGCGGCGCG TCGATCAGCC TGTGCTCGGC
TGGCTCGATG CTTGGCTGGG CGGGCAACCG GCCGGGCAGG ACAAACTGCG CCAACTGGCC
TTGCGGCGGT GCCAGCAGTT ATCGTCGCCG GTGGCGGCCA AGGCGGTGGA AGACACGGCG
TGCTACCGAT ACGGGCGGCT GCTGTCGCGC AACGAGGTCG GCGCGAATCC GGGCGAGTTT
TCCATGAGCG CCAACGCGTT CCATCACGCC ATGCAAGCGC GCGCCCACAC GTGGCCTCAC
GCGATGCTCA CCACCGCCAC GCACGACCAC AAGCGCGGCG AAGACGTGCG CGCGCGATTG
GCCGTGCTGT CTGAGCGTCC GACGCAGTGG CTGGCCGCCG CACACCAATG GCGTGCGGAA
CACGCTGCGT GGGTGCAAAA ACTGCCTGCC GGCCCCGCGC CCTCGCCCGC CGCGCAGTGG
ATGCTGTATC AAACGCTGGT GGGCATCTGG CCGGCGGACC TCGACTGGCA TGACGCCGAT
GCCGTGCGCG AGTTGGCCGA GCGCGTCGCA CAGTGGCAGG AAAAGGCGCA GCGCGAAGCC
AAGCTGCGCA CTGACTGGTT CGCGCCCGAT GCGGACTACG AAGCCGCCAG CCGCAATTTC
GTCTTCACGC TGCTGACAGG CGAAGCGGCC CCGACCTTCC TGCCTTCGCT CTGCGCTTTC
GTGCAAAGCG TGGCGCCCGC CGCGGCCATC AACGGCCTCG TGCAGACCTT GCTGCGCACC
ACGCTGCCCG GCGTGCCCGA CCTCTATCAG GGCGCCGATT TCTGGGACAC CAGCCTCGTT
GATCCCGACA ACCGCCGGCC CGTCGACTAC GCCGCTCGGC ACCGCGCATT GCGGGCATTG
CACTTGCATG CGGGCCATGG CCTCGCGTCA CTGCTCGCGC ATTGGACCGA CGGCCGCATC
AAGCAAGCCG TACTGGCACG TGCACTGGCC CTGCGTGCCG CGCTGCCAGC GGTGTTCGAA
TCCGGCGATT ACCAACCGCT GGCCGTGACC GGCAGCGGCG CACAGCACGT GTTGGCGTTT
GCGCGTGTGC ATGGCGCCAA CGCGATCATC GTGATCGTGC CGCTGCATGC CTCCGCACTG
CTGGGCCATG CCCCCGCACC AACGTTCGCG GATGGTGCTT GGCGGGACAC CACGGTCTGT
TTGCCGTCCA CGCTCTCGCA TCTTCCCCTG CATAACGCAT TCGACGGCCA GACACTGCAC
AGCCCGCGCC TGGCGTTGGG CCAGGTGCTG GCGCACTTGC CGGTCGCCCT GCTGCATACC
TGA
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| Protein sequence | MSELTTPPAP VTLQRVPRAT VRLQLHRDFT FDHARALLDD FAALGISHLY TSPITTAQPG
STHGYDVVDP THVNPELGGE RALEQLVDAL HARGMGLVVD IVPNHMGVGG AHNTWWLDVL
ESGPESTYAN FFDIDWQPPN PALRNKVLAP FLGENYADAL AGGRLQLTYD DTAARLAIAY
YDHRFPIALA DYAALLRAGN ADTATHAVAD RFAALGTIRS LRTRRERADE ARDALRNLAT
TEAGAAHIAE AVRTLNAQPD QLDALMARQH WRLAHWCTAN DEINWRRFFD IGSLAGLRME
RAEVFEATHA LLFRLYRLGW IDGVRIDHVD GLADPAAYCR QLRRRLQDEH AARPADRLTN
HPWIVVEKIL ASDEPMRTDW GVDGTSGYDF MNQVGALLHD AHGETALTQG WLEWIGAPVA
DAPFSATTAP ARRQILHVHF AAELDSATSA LHAVAQQNHS SHDVTWHAIR RALAEVIVHF
PVYRTYANAQ QRDAQDSAIL QTAMSRAATC LRRVDQPVLG WLDAWLGGQP AGQDKLRQLA
LRRCQQLSSP VAAKAVEDTA CYRYGRLLSR NEVGANPGEF SMSANAFHHA MQARAHTWPH
AMLTTATHDH KRGEDVRARL AVLSERPTQW LAAAHQWRAE HAAWVQKLPA GPAPSPAAQW
MLYQTLVGIW PADLDWHDAD AVRELAERVA QWQEKAQREA KLRTDWFAPD ADYEAASRNF
VFTLLTGEAA PTFLPSLCAF VQSVAPAAAI NGLVQTLLRT TLPGVPDLYQ GADFWDTSLV
DPDNRRPVDY AARHRALRAL HLHAGHGLAS LLAHWTDGRI KQAVLARALA LRAALPAVFE
SGDYQPLAVT GSGAQHVLAF ARVHGANAII VIVPLHASAL LGHAPAPTFA DGAWRDTTVC
LPSTLSHLPL HNAFDGQTLH SPRLALGQVL AHLPVALLHT
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