Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4045 |
Symbol | |
ID | 8021733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 620438 |
End bp | 621685 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832826 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002983966 |
Protein GI | 241665607 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGCT GGTTCAAAGA GATTTCGAAA GGGGAAAAGC GCACGTTCTG GGCCTGCTTT GGCGGCTGGG CGCTCGACGC GCTGGACGTG CAGATGTTCA GCCTCGTCAT CCCGACCATC ATCGCGGCCT GGCACATCGG CAAGGCCGAG GCGGGGCTGG TGTCGGGCAT CACGCTGGTG GCGTCGGCCC TGGGCGGCTG GATTGCCGGC GCATTGACCG ACCGCTTCGG CCGCGTGCGT ACGCTGCAGA TCACGGTGCT GTGGTTCTCG CTGGCCACAT TCGCCTCGGC CTTCGCGCAG AATTTCGAGC AGTTCCTGGT GCTCAAGGCC ATCCAGGGTT TCGGCTTTGG CGGCGAATGG GCGGCGGGCG CCGTGCTAAT GGCCGAGAGC ATTCGCGCCA GCCACCGCGG CAAGGCCATG GGCACCGTGC AGAGCGCATG GGCCGTGGGC TGGGGCGCGG CGGTGCTGCT GTATGCGCTC ACGTATTCCT TCATTGAACC CGATCTTGCC TGGCGCGTGA TGTTCGCTGC GGGGTTGCTG CCGGCGCTGC TCATCATCTA CATCCGCCGT GGCGTGCAGG AACCCGTGCC GGCGGCCACG CCGGATGCGA ACGCCAACGC GATGCCGATC TCTCGCTTTC CGCTGCTCGA CATCTTCCGC CCGCAGGTGC TGCGCATGAC GCTGATCGGC GGCCTGCTGG GCGTGGGCGC GCATGGCGGC TACTACGCGC TGATGACGTG GCTGCCGACG TATCTGAAGA CAGAGCGGCA CTTGTCGGTG CTCGGCACGG GCGGCTACCT GGCGGTGATC ATCTTCGCCT TCTGGTGCGG CTGCGTGGCC AGTGCATGGC TGCTGGACGT GCTCGGCCGT CGCGGCAACA TCCTGCTGTT CTCGTGCTGC TGCGTGGTGA CGGTGCTGGT GTATCTGCTC GTACCGCTGT CGGATGGCGC GATGCTGGTG CTGGGCTTTC CGCTGGGCTT CTTTGCGGCG GGCATTCCGG CCAGCATGGG CGCGTTGTTC AACGAGCTGT ATCCGCAGGG CGTGCGCGGC ACGGGCGTGG GCTTTTGCTA CAACTTCGGC CGCGTGGTGT CTGCCGCGTT CCCGGTGCTG GTGGGCAAGA TGAGCGCCTC GATGTCGCTG GGCACGGCCA TCGGCATCGA CGCGGCCATC GCGTATTCGA TCGTCGCAGT GGCCGTGCTG ATGCTGCCCG AAACGAAGGG CCGCGACCTC GCTGCCGTTA CGGTCTGA
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Protein sequence | MFGWFKEISK GEKRTFWACF GGWALDALDV QMFSLVIPTI IAAWHIGKAE AGLVSGITLV ASALGGWIAG ALTDRFGRVR TLQITVLWFS LATFASAFAQ NFEQFLVLKA IQGFGFGGEW AAGAVLMAES IRASHRGKAM GTVQSAWAVG WGAAVLLYAL TYSFIEPDLA WRVMFAAGLL PALLIIYIRR GVQEPVPAAT PDANANAMPI SRFPLLDIFR PQVLRMTLIG GLLGVGAHGG YYALMTWLPT YLKTERHLSV LGTGGYLAVI IFAFWCGCVA SAWLLDVLGR RGNILLFSCC CVVTVLVYLL VPLSDGAMLV LGFPLGFFAA GIPASMGALF NELYPQGVRG TGVGFCYNFG RVVSAAFPVL VGKMSASMSL GTAIGIDAAI AYSIVAVAVL MLPETKGRDL AAVTV
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