| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4033 |
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| Symbol | |
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| ID | 8021721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 606230 |
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| End bp | 607756 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832815 |
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| Product | Carotenoid oxygenase |
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| Protein accession | YP_002983955 |
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| Protein GI | 241665596 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.804116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC GATCCTTCAT TGCGGCCCTG GGCGCCGCAC CGTTTGGCTT GACCCTGACC
GATGTAATGG CCGCCACCCC GGACCCATGG GCTGCGGGGT TTGCAGCGGC GCGCGCGCAG
TATCCGTGGC TGGCGGGCTA CCAGGGCGTC AGCGCCGACA TGCCGACTCG CGCGCTGAAG
GTGGAAGGCA GGTTCCCGCC CGCGTTGCAC GGCGCGTTCT ACCGAAATGG CCCCGCGCGG
CATGAGATCG GCGGCGTGCG TTATCACCAC CTGTTTGATG GCGACGGCAT GATCCAGCGC
TACGACATCA GCGAGCAGGG CGTAACGCAC CGCGGCGTGT TCGTGCGCAC TGACAAGTTT
GTCGCCGACA CCGCCGCCGG CCGGCCGTTG CGCGCGACGT TCGGCACCGC CAACCCCGAC
ATGGAGCCGG TCGCTTCGCC CGACAGCATC AATGTGGCCA ACACCAGCCT GGTGATGCAT
GGCGACGAGA TGCTCGCGCT GTGGGAAGGT GGCTCGGCCA CGCGTGTCGA TCCGGATTCT
CTGCGTACGC TGGGAGTGCA GACCTGGCGC GACGACTACA AGGGCATGCC GTTCTCCGCC
CACCCCAAGG TCGAGCCCGA CGGCACGCTG TGGAATTTTG GCGTGAGCAG CGCGGCTGGT
CTGCTGACTG TCTACTGCGT GGGCGCGGAC GCTGCGCTCA AGCGTGTGGA ATCGGTCAAC
GTTCCGGACG TGGCGATGGT GCATGACTTT GCCGTGACGC AGCGCCACCT GGTGTTTCTG
CTGCCTCCGT TCGTGTACGA CGTTGAACGC TCGCACGCCG GCATGTCGTT TCTCGATTCC
CATGTCTGGC GGCCGGAGCT GGGCATGCGC GTGCTGGTGC TGGATAAGGA CGACATCACG
CGCATGCGCT GGCTGAAGTT GCCGGAGGGC TTTGTGTTCC ACCTGGGCAA TGCTTGGTCG
TCGCCGGATG GGCAGGAGAT CCACCTCGAT TACCTTCGCT CGGACGATGC CTCGGTCGTC
ATCACGTCGC TGCGTGAATT GATGCGTGGG CAGATTCGCC CGTCGCCGGG CGCGCGCCTC
ACGCAAGTGC AACTGAACCT GCGAACAGGT CGGGCTGAGC AGTTCAGCAC CGCGCATGTG
GCCGAATTCC CGAAGATCGA CACGCGGCGC ACCGCGCAGC GTCATCGTGC GCTGTTCATG
GTGGCCCACA CGGCGCCATT GTCGAATGGA AGCCCGCACG CGCTGCACGG CTTCGACACG
GTCATGCGCG TCGATACGGA TTCAGGGCAG GCCGAGCAAT ACCGCTTCGG GCACCGCACG
CTGGTGGAAG AACACGTGTT CGTGCCGGCA TCGGCCAGCG CCCGTGAAGG CGAGGGCTGG
TTGATCGGTA CGGTGTTCGA TGTGGATGCC GGCTGTACGA GGCTGACGGC GTTCGATGCA
CAGCATGTTG CCGCAGGGCC CGTCGCCACG GCAAGCCTGA ACGGCGTGGC GCCGCTCGGC
CTGCATGGAT TGTTTCGCGC GGCTTAA
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| Protein sequence | MQRRSFIAAL GAAPFGLTLT DVMAATPDPW AAGFAAARAQ YPWLAGYQGV SADMPTRALK
VEGRFPPALH GAFYRNGPAR HEIGGVRYHH LFDGDGMIQR YDISEQGVTH RGVFVRTDKF
VADTAAGRPL RATFGTANPD MEPVASPDSI NVANTSLVMH GDEMLALWEG GSATRVDPDS
LRTLGVQTWR DDYKGMPFSA HPKVEPDGTL WNFGVSSAAG LLTVYCVGAD AALKRVESVN
VPDVAMVHDF AVTQRHLVFL LPPFVYDVER SHAGMSFLDS HVWRPELGMR VLVLDKDDIT
RMRWLKLPEG FVFHLGNAWS SPDGQEIHLD YLRSDDASVV ITSLRELMRG QIRPSPGARL
TQVQLNLRTG RAEQFSTAHV AEFPKIDTRR TAQRHRALFM VAHTAPLSNG SPHALHGFDT
VMRVDTDSGQ AEQYRFGHRT LVEEHVFVPA SASAREGEGW LIGTVFDVDA GCTRLTAFDA
QHVAAGPVAT ASLNGVAPLG LHGLFRAA
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