Gene Rpic12D_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4022 
Symbol 
ID8021710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp597785 
End bp598288 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content63% 
IMG OID644832804 
Productthioesterase superfamily protein 
Protein accessionYP_002983944 
Protein GI241665585 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.09189e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC AATCCCACCA GCTCAGCATG ACGGTGCTGA TGACGCCCGA CATGGCCAAT 
TTTTCCGGTA ACGTGCACGG CGGCCACATC CTCAAGCTGC TCGATCAGGT CGCGTATGCG
TGCGCGAGCC GCTACGCCGG CCGCTATGTC GTGACGCTGT CGGTGGACCA GGTGGTGTTT
CGCCAGCCGA TTCACGTAGG TGAACTGGTG ACGTTCCTCG CGTCGGTCAA CTACACCGGT
CGCACGTCGA TGGAAATCGG TATCAAGGTC GTGACGGAAA ACATCCGCAA CCAGGTCGTG
CGCCATACCA ACAGCTGCTA CTTCACGATG GTGGCCGTGG ACGATGACGG CAAGCCGGCC
GACGTGCCGC CGCTGGCGCC CGCCAACGCC GAAGAAAGGG AACGCTTCGA AGCCGCGCAG
CAGCGCCGCG CCCTGCGGCA GGAAATGGAA GCGCGCCACA AGGCGATCAA GGCGACCTAC
AGCACGCCGG TTTCGGGCGG TTGA
 
Protein sequence
MNTQSHQLSM TVLMTPDMAN FSGNVHGGHI LKLLDQVAYA CASRYAGRYV VTLSVDQVVF 
RQPIHVGELV TFLASVNYTG RTSMEIGIKV VTENIRNQVV RHTNSCYFTM VAVDDDGKPA
DVPPLAPANA EERERFEAAQ QRRALRQEME ARHKAIKATY STPVSGG