Gene Rpic12D_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4021 
Symbol 
ID8021709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp596836 
End bp597645 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID644832803 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002983943 
Protein GI241665584 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.97083e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCT TCGACGATGA TCTGACGCGG TTTGCCGCCC ACGGTGCAGA ACCGCTGCCC 
CCCGCCGTTG AGCAAGGCCA TGTCGAGCAC GACGGCGCCC GCATCTGGTA TGCGACCTTC
GGTGCCGGCA CACCTGTGAT CTTGCTGCAT GGCGGGCTCG GCCATGGCGG CAATTGGGGA
TATCAGGTTC CGGCACTCAT GACTGCTGGC TACCGGCCTA TCGTCATTGA TAGCCGTGGG
CACGGTCGCA GCACGCGCGA TGCGCAGCCT TACGCCTACA CGCGCATGGC TTCCGACGTG
CGGGCCGTGA TGGATGCGCT GCGCATCGAC CGCGCCGCCT TCATCGGCTG GAGCGACGGT
GCTTGCGTTG CGCTCACCCT CGCCATGCAG ACACCGGAGC GCGCTATTGG CGTGTTCTTC
TTCGGTTGCA ACATGGATCC AAGCGGCGCC AAACCCTTCG CGCCGACGCC CGTCATCGAC
CGCTGCTTCG GTCGCCACCT AAAGGATTAC ACCGCGCTGT CATCCACACC GGACGACTTC
GATGCCTTTG TCGAGGCCGT CACCGAAATG ATGCAGACGC AGCCGAATGC AACAGCCGAG
GAACTGGCGG CGACCCGTGT GCCGGTCACC ATCGCGCAGA GCGAACACGA CGAGTTCATC
TGGCCCGAGC ACGCGCACTA TCTGGCACGG ACCCTTCCTG AAGCACAGTT TGTGTTGCTG
CCGGGCGTGA GCCATTTCGC GCCGTTGCAG CGACCGGCGG TGTTCAACGA CGCCGTGCGC
GCGTTCCTTC ACGGAATTTG TCAGACGTAG
 
Protein sequence
MDTFDDDLTR FAAHGAEPLP PAVEQGHVEH DGARIWYATF GAGTPVILLH GGLGHGGNWG 
YQVPALMTAG YRPIVIDSRG HGRSTRDAQP YAYTRMASDV RAVMDALRID RAAFIGWSDG
ACVALTLAMQ TPERAIGVFF FGCNMDPSGA KPFAPTPVID RCFGRHLKDY TALSSTPDDF
DAFVEAVTEM MQTQPNATAE ELAATRVPVT IAQSEHDEFI WPEHAHYLAR TLPEAQFVLL
PGVSHFAPLQ RPAVFNDAVR AFLHGICQT