Gene Rpic12D_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4017 
Symbol 
ID8021705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp594487 
End bp595263 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID644832799 
ProductRibosyldihydronicotinamide dehydrogenase (quinone) 
Protein accessionYP_002983939 
Protein GI241665580 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.117199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC TGATCGTCTA CGCCCATCCC GAACCCAAGT CGCTCAACGG CGCCCTCAAG 
GACTTTGCCG TCCAGCGTCT GGAAGCCGCC GGCCACACCG TGCAGGTATC GGACTTGTAC
GCCATGCAAT GGAAGGCCGC GCTGGATGCA AGCGACAGCA CTGTTGGGCC GGTCGGTCCG
CATTTCCATC CGTCGCTCGA TTCCAAGCAC GCGTTCGAGA ACGGCCTGCA AGCCGATGAC
ATTGCTGCCG AACAAGCCAA GCTGCAATGG GCCGACGCCG TGATCCTGCA GTTTCCGCTG
TGGTGGTTTT CGATGCCGGC CATCCTGAAA GGCTGGGTCG AGCGCGTCTA TGCATACGGC
TTTGCCTATG GCGTTGGCGA GCATTCCGAC ACCCACTGGG GCGACCGCTA CGGCGAAGGC
ACGCTCGCCG GCAAACGTGC CATGCTGATC GTCACCACGG GTGGCTGGGA GTCGCACTAC
AGCCCGCGCG GCATCAACGG CCCGATCGAT GACATCCTGT TCCCGATCCA GCACGGCATC
CTGTACTACC CCGGCTTTGA GGTCGTGCCG CCGTTCGTGA GCTACCGCAC CGGCCGCATG
GACGACGCGC GCTTTGCGCA GACCACGCAG GCGCTGGGCC AGCGACTCGA CACCTTGTTC
ACCACCGCGC CGATCCCGTT CCGCCCGCAG AATGCAGGTG AATACGAGAT CCCGTCGCTC
ACGCTGCGTG CCGAGATCGC GCCTGAAAAA TCGGGCTTCG CTGCGCATCT CGCCTAG
 
Protein sequence
MNVLIVYAHP EPKSLNGALK DFAVQRLEAA GHTVQVSDLY AMQWKAALDA SDSTVGPVGP 
HFHPSLDSKH AFENGLQADD IAAEQAKLQW ADAVILQFPL WWFSMPAILK GWVERVYAYG
FAYGVGEHSD THWGDRYGEG TLAGKRAMLI VTTGGWESHY SPRGINGPID DILFPIQHGI
LYYPGFEVVP PFVSYRTGRM DDARFAQTTQ ALGQRLDTLF TTAPIPFRPQ NAGEYEIPSL
TLRAEIAPEK SGFAAHLA