| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4012 |
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| Symbol | |
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| ID | 8021700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 590315 |
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| End bp | 591397 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832795 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_002983935 |
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| Protein GI | 241665576 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.406694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCTTT CTTCCAACAA GCTGCCCCCC TGGACAGTCG CTGCCCCGCT GCTCGCGTGG
GTGGTGCTGG CCGGCGGCGC GTTCATGACG CCCCCCGGCT GGCTGATCGC ACTGATGGCG
CTTGCACTGG CGAGTGCCGT CTTTGCAGCC GTCCACCATG CCGAGGTCGT CGCGCACAAG
GTGGGCGAGC CCTTCGGCAC GCTCGTCCTG GCGATTGCCG TGACCGTGAT CGAAGTCGCG
CTGATCGTAT CGGTGATGCT CTCTTCGGGG CCAGAGAAGG CGGGATTGGC GCGCGACACC
GTGTTTGCCG CGGTCATGCT CATCTGCAAC GGAATCGTGG GCGTGTGCCT GTTCGTGGGC
GGCCTGCGTC ACCGCGAGCA AGCCTTTCAA GCGCCGGGCG CCACCGCCGC GCTGGCCGTG
CTGGCTGCAC TGGTCACGCT GACCATGGTG CTGCCCAATT ACACGAGTTC CACGCCGGGG
CCGGTCATGA CTTCGTCGCA ATTGGCCTTT GCCGGGGTGA CGTCGCTGGT GCTGTACGGC
TGCTTCGTCA TCGTGCAGAC CATCCGCCAC CGCGATTACT TCCTCGTCGA CAGTGCCAAC
GAAGACGTGC ACGCACCGCC GCCGCCCGCA CGCGTGGCGG CGCTCAGCGC GGTGTTGTTG
ATGGTGTCGC TGGTGGCAGT TGTTGGGCTG GCCAAAGTGC TGTCGCCTTC GGTGGAAGCG
GCCATCCTGA ATGCCGGCGC ACCGCCCGCC ACCGTCGGCA TCGTCATCGC CGCGCTGGTG
TTGTTGCCGG AATGCCTGGC CGCCCTGCGC GCCGCCAATG CAGACCGCAT CCAGACGAGC
CTGAACCTCG CACTGGGCTC GGCGCTGGCG AGTATCGGAC TGACCATCCC GACGGTGGCC
GCCGTGTTCA TCTGGATCGG CCGTCCGCTC GAACTGGGCC TGGGCCCGAA GGAAATGGTC
CTGCTGTTCC TCACGCTGAT CGTGTCGTCG CTCACGCTGG GCAAGGGTCG CACGACCATC
CTGCATGGCG TCGTGCATCT GGCGATCTTC GCGGCGTATC TGTTTCTCTC GATCGTGCCC
TGA
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| Protein sequence | MALSSNKLPP WTVAAPLLAW VVLAGGAFMT PPGWLIALMA LALASAVFAA VHHAEVVAHK
VGEPFGTLVL AIAVTVIEVA LIVSVMLSSG PEKAGLARDT VFAAVMLICN GIVGVCLFVG
GLRHREQAFQ APGATAALAV LAALVTLTMV LPNYTSSTPG PVMTSSQLAF AGVTSLVLYG
CFVIVQTIRH RDYFLVDSAN EDVHAPPPPA RVAALSAVLL MVSLVAVVGL AKVLSPSVEA
AILNAGAPPA TVGIVIAALV LLPECLAALR AANADRIQTS LNLALGSALA SIGLTIPTVA
AVFIWIGRPL ELGLGPKEMV LLFLTLIVSS LTLGKGRTTI LHGVVHLAIF AAYLFLSIVP
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