Gene Rpic12D_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3995 
Symbol 
ID8021683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp577719 
End bp578636 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID644832780 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002983920 
Protein GI241665561 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCATA CCACCACGCC CGCATCCAGC CACGTCACTG ATCTGGCCCT GCTGCTCACG 
CTGTCGACCT TGTGGGGCGC GTCGTACACG TTCATTCGGG TGGGCGTGGA GACCATTCCG
CCGCTCACCT TCATCGCCGC CAGAACGTTG ATCGCGGCGA CGCTGCTGTT GGCGTGGATG
CGCAGCCGCA ATATCCGCAT GCCCCGAGAC AGGCAGGTCT GGATGCGCTT CGGCGTGCAG
TCGCTGCTCA ACAGCGTCGT GCCGTTCACG CTCATCGCCT GGGCCGAGCG CTCGGTTGGC
GCGAGTCTGG CGACCGTCCT GAATTCGACG TCGCCCGTGA TGGTGTTTGT GGCCACGGCG
TTCGTTACGC GGCACGAATC GGTGTCGTTG CGCAAGCTGG TCGGCGTGAT TGCCGGGTTT
GTCGGCACGT GTTTTGTGAT TGGGCCGAGC GCGTTCGATG GGCTGGGAGG CCAGCTCGTT
GCGCAACTGG CCATCCTGGC GGCCACGGCG TGCTATGCAG GCGCGGCCAT CTACGGCCGG
TCGTTCAAGG GGCTGCACCC TGCGGCGCCT GCTACCGGTT CGTTGCTGAT GGGCGCGTTG
GTGCTGACGC CCACCAGTCT GCTTGTGGAT CATCCTTGGG CACTTCAGCC TTCTGCGCGT
TCGCTGATGG CGTTGGTGGC GCTGGCGGTG TTCTCTACGG CCCTCGCGTT TGCCATTTAC
TTCCGGCTCA TTCAAACGCT CGGCGCGATC GGTACGACTG CGCAGGCCTA TCTGCGCGTG
CCGATCGGGG TAGCGATCGG CGTGGTGTTT CTGGGGGAAT CGTTGCCGCC TTCAGCGTGG
ATCGGGCTGG CGTGTGTGGT GGTGGGGGTG GCGGCAATGT CGATGCCGGC GCGGGCCACG
CAAGTGCTGC GGGCGTAG
 
Protein sequence
MPHTTTPASS HVTDLALLLT LSTLWGASYT FIRVGVETIP PLTFIAARTL IAATLLLAWM 
RSRNIRMPRD RQVWMRFGVQ SLLNSVVPFT LIAWAERSVG ASLATVLNST SPVMVFVATA
FVTRHESVSL RKLVGVIAGF VGTCFVIGPS AFDGLGGQLV AQLAILAATA CYAGAAIYGR
SFKGLHPAAP ATGSLLMGAL VLTPTSLLVD HPWALQPSAR SLMALVALAV FSTALAFAIY
FRLIQTLGAI GTTAQAYLRV PIGVAIGVVF LGESLPPSAW IGLACVVVGV AAMSMPARAT
QVLRA