Gene Rpic12D_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3965 
Symbol 
ID8021653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp542739 
End bp543524 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID644832753 
Productmolybdenum ABC transporter, periplasmic molybdate-binding protein 
Protein accessionYP_002983893 
Protein GI241665534 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000683458 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0526206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGTT TCTCGCTGAG GTTCGCGTTT CGGGCGCCGA TGCGCGCCGC GGGGTGGGTG 
GCTGCGCTGT CGCTGGGGCT GGCCGCGCCG GCTCATGCGG CGGACCTTGT GGTGTCAGCC
GCCGCGAGCC TGACCAACGC ATTCAAGGCA ATTGCGCAGC AATACGAAGC GCAGCATCCG
GACACCAAGG TCGTGCTGAA CTTCGGAGCG TCGGACGTAC TGATGCAGCA GATCGCGCGC
GGCGCCCCGG CCGATGTGTT TGCCTCCGCC GATCAGCAGG CGATGGACAA GGCCGTGGCC
GAGAAGCTGA TCAAGCCCGA ATCGCGCCAC GACTTCGTGG CCAACCAGCT CGTGCTGATC
GTGCCCGCCA CGGGCACGGT GCCCGTGCAT GCGCTGGCTG ATCTGACCCG GCCCGAAGTG
AAGCGCGTGG CGATCGGCAA TCCGGCATCG GTGCCGGTCG GCCGCTATGC CAAACGTGCG
CTGGATGCGG CCCAGCTCTG GGAGCCGGTC TCGGCCAAGG CGGTGCTGGC GCAGAACGTG
CGCCAGGCGC TGGACTACGT ATCGCGCGGC GAGGTCGAAG CCGGCCTGGT GTTCTCCACC
GATGCCGCCA TCGCTGCCGA CAAGGTGAAG GTGGCGAGCG CCGTGCCGCT GAATGTGCCG
CTCACCTACC CGATCGCCGT GACGTCGGGC ACGAAGCAGC CGCAACAGGC GACCGACTTC
GTGGCGTTTG TGATGTCGCC TGCAGGGCAG GCGGTGCTTG CCAAATACGG TTTCCTGAAG
CCCTGA
 
Protein sequence
MPCFSLRFAF RAPMRAAGWV AALSLGLAAP AHAADLVVSA AASLTNAFKA IAQQYEAQHP 
DTKVVLNFGA SDVLMQQIAR GAPADVFASA DQQAMDKAVA EKLIKPESRH DFVANQLVLI
VPATGTVPVH ALADLTRPEV KRVAIGNPAS VPVGRYAKRA LDAAQLWEPV SAKAVLAQNV
RQALDYVSRG EVEAGLVFST DAAIAADKVK VASAVPLNVP LTYPIAVTSG TKQPQQATDF
VAFVMSPAGQ AVLAKYGFLK P