Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3914 |
Symbol | |
ID | 8021601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 489483 |
End bp | 490877 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832702 |
Product | Chloride channel core |
Protein accession | YP_002983843 |
Protein GI | 241665484 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA CGCCGCCTCC ATCCCCCCCT CCATTGCCAC GCCCGGCGTG GTGGCAGCGT GTGGCCGCGC GATTGCCATT CGGGCGCGTG CACCTGGTGT TCGTATTCGC GGGCCTGATC GGCTGCGCGG GGGCGTTCTC GACGATTCTC TTCCGCGAGT GCCTGCGGCA ATTGCAGTGG TGGATTTCCG GCACCGACCA GGGCCTGGTG GCTACGGCGC GAGCGCTGCC CTGGTGGGCG CGGCTGCTGG TGCCGACCGT GGGTGGCATC CTCGCAGGCT TGACGCTTCA GTTCGGTCTG AAGTGGATTC CGCGCAAGGG TTCGGAAGAC TACATGGAGG CCATTGCCGT GGGCGACGGC GTGCTGAGCG CTCGGCAGAG CCTGGTGCGC AGTGCGTCGT CGCTGTGCTC GGTGGCCAGC GGTGCGTCCA TCGGGCGCGA GGGGCCGATG GTGCAGCTTT CGGCGATGTG CGGTTCGCTG TTGGGCCGGG CGTTACGGCG CGTGATGCCG GTTTCGGTCG AGCAGCTGCG GCTGCTGGTC GCGTGTGGGG CGGCAGCGGG TATCACCTCG GCTTACAACG CGCCCATCGC GGGCGCCGTG TTTGTCTGCG AGATCGTTTT CGGTGTCATC ACCACGGCAA CGCTCGGGCC GCTGCTGGTA GCAGCCGTCA CCGCCGATAT CGTGCTGCGC CAGTTCTTCG GCTATGGCGC GGTCTACGAG ATGCCGCATT TCGATTTCGT CTCTGGCTGG GAAGTGCTGA CGTATCTGGG GCTGGGGCTG GCGGCCGGGA TGGCTGGCCC CTTGCTGCTG GGCTTGATCG ATCGCGCGCG CGATGCGTTC TCCCGGACGA AGCTGCCGCT GACGTTGCGG CTGGCCGTAG GCGGGCTGAT TGTTGGCGTG CTGTCGACAC GGGTACCAGA GGTCTGGGGC AATGGATACA GCGTGGTCAA CGGTTTCCTG CACGAGCCGT GGCTGTGGCA GACAGTGGCG CTCGTGCTGA TCTGCAAGGT GGCGGCCACA GCGGCCAGCG CCGGCTCGGG CGCAGTCGGT GGCGTGTTCA CGCCCACGCT GTTTTGCGGC GCGGCGCTGG GGCTGCTCTA TGGCACCGGC ATGCACGCCT TGCTGCCCGG CGCGGCGCCG GTGCCGATCA GTTACGCGGT GGTGGGCATG GGCGCGCTGC TGGCCGCCAC CACGCACGCG CCGCTCATGT CGATCCTGAT GATTTTCGAG ATGACGCTGT CATATCAAGT GGTACTGCCG CTGATGCTCG CCTGCATTAC CGGCTACGTC ACGGCGCATG CGACAGGCGC ACCGTCGGTG TACGCACGTG CACTGGCGCG CAATCGTGAC GACGCGCAGC ATCTGCCATC GGCTTCGGAA GCTACGCAGA AATAG
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Protein sequence | MTDTPPPSPP PLPRPAWWQR VAARLPFGRV HLVFVFAGLI GCAGAFSTIL FRECLRQLQW WISGTDQGLV ATARALPWWA RLLVPTVGGI LAGLTLQFGL KWIPRKGSED YMEAIAVGDG VLSARQSLVR SASSLCSVAS GASIGREGPM VQLSAMCGSL LGRALRRVMP VSVEQLRLLV ACGAAAGITS AYNAPIAGAV FVCEIVFGVI TTATLGPLLV AAVTADIVLR QFFGYGAVYE MPHFDFVSGW EVLTYLGLGL AAGMAGPLLL GLIDRARDAF SRTKLPLTLR LAVGGLIVGV LSTRVPEVWG NGYSVVNGFL HEPWLWQTVA LVLICKVAAT AASAGSGAVG GVFTPTLFCG AALGLLYGTG MHALLPGAAP VPISYAVVGM GALLAATTHA PLMSILMIFE MTLSYQVVLP LMLACITGYV TAHATGAPSV YARALARNRD DAQHLPSASE ATQK
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