| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3910 |
|---|
| Symbol | |
|---|
| ID | 8021597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 486148 |
|---|
| End bp | 486873 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644832698 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002983839 |
|---|
| Protein GI | 241665480 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.984929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TGCTGGAAGT CAAAGGGCTG CAGGTGTCGT ACGGACACAT CGCAGCCGTC
AAGGGTATCG ACTTTGCGCT CAAGGCCGGC GAGATCACCT CGCTGGTGGG CGCGAACGGC
GCGGGCAAGT CGACCACGCT GCTGGCGCTC TCGGGGCTGA TCCCGAAGTC GCAGGGCGAC
GTGCGTGGCC AGATCCTGTT CGAGGGGGAC GACGTTTCGC AGTGGTCGGC CCACAAGCGT
GTGGAGCGCG GCATCGTGCA GGTCGCGGAG GGCCGTGCCA CGTTGACCAC CATGACGGTG
CGCGAAAACC TCGAGCTTGG CGCTTATACG CGCAAGGACC GCAGCCAGAT CGCTTCCGAC
CTGGAGCGTG TCTTCCATCT GTTCCCGCGC CTGAAAGAGC GCATTGATGG CATGGCCGGC
AACCTGTCGG GCGGCGAACA GCAGATGCTC GCCATCGGCC GCGCGTTGAT GGCCCGCCCC
CGTGTGCTGC TGCTTGACGA GCCGTCGATG GGCCTCGCAC CGATCATTGT GCAGGAGATT
TTCCGCATCC TGCGCACCAT CAACGCGGAA GGACTGACGA TCTTCCTGGT TGAGCAGAAC
GTGCGGCAGG CGTTGAAGAT CGCGCAGCAC GGCTATGTGT TGGAGACCGG TCAGATCGTG
CTGGCCGACA GCGGGCGCAA CCTGCTGGGC AATCCGCGCG TGCTCGAGGC CTACCTCGGC
GGCTGA
|
|---|
| Protein sequence | MTTLLEVKGL QVSYGHIAAV KGIDFALKAG EITSLVGANG AGKSTTLLAL SGLIPKSQGD
VRGQILFEGD DVSQWSAHKR VERGIVQVAE GRATLTTMTV RENLELGAYT RKDRSQIASD
LERVFHLFPR LKERIDGMAG NLSGGEQQML AIGRALMARP RVLLLDEPSM GLAPIIVQEI
FRILRTINAE GLTIFLVEQN VRQALKIAQH GYVLETGQIV LADSGRNLLG NPRVLEAYLG
G
|
|---|
| |