Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3804 |
Symbol | |
ID | 8021491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 372397 |
End bp | 373212 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832594 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002983735 |
Protein GI | 241665376 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC GTCACTCCAC GCACGGATCT TTTTCGCCTC ACACCCACGC TGCCATGACT CAAACTGATT TGCACTCCAA CCCCAACGTC ACCCCCGCGC TGCGCGACCA GGTCATCGTC ATCACCGGCG CCGGCCGCGG GCTGGGCGCC GCCATCAGCC GTGTGCTGTC GGCCGAGGGC GCCACCGTCG TTTCCACCGA TTACGACGCC GCCACCGCGG ACCGCACCGC CGCCGAGCTC ATCGCCGAAG GCGGACAATC GCATGCCATC GCCCTGGACG TGGGCGACGA ATCTGCTGTA CGCGGCGCGC TCGATGAGGT GGTCGACCGG TTCGGCCGCC TCGACGCCGT CATCAACAAC GCGGCCATCG ACATCACGCT GCCCATCGAA GCACTCAACG TCGAAGACTG GGACCGCGTG GTACGCACGA ACCTGCGCGG GCCGTTCCTG CTGGCCAAGC ACGCCAGCAC GCTGATGCGC CAGCGCGGCA GCGGGGCCAT CGTCAATATC GCCTCCACCG CATCGCGCCG CGCATGGCCG AATGCATCGG TCTACCACGC CACGAAATGG GGCTTGCTGG GCCTGTCGCA CGCGTTGCAT GCCGAGTTGC GCCCGCACGG GATCAAGGTC TCGGCCGTGA TTGCCGGCGG CATGCGCACG CCGTTCCTGC TGGACCGCTT TCCCGATATC GACGTCGGTA ACCTCCAGGA CCCGGCCAAC GTGGCGGCGG CCGTGCGCTT CGTGCTGCTG CAGCCGGCCG AAACCGTCAT CCCGGAAGTG ATGGTGCTGC CGATGCGGGA GACGTCATGG CCCTGA
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Protein sequence | MNERHSTHGS FSPHTHAAMT QTDLHSNPNV TPALRDQVIV ITGAGRGLGA AISRVLSAEG ATVVSTDYDA ATADRTAAEL IAEGGQSHAI ALDVGDESAV RGALDEVVDR FGRLDAVINN AAIDITLPIE ALNVEDWDRV VRTNLRGPFL LAKHASTLMR QRGSGAIVNI ASTASRRAWP NASVYHATKW GLLGLSHALH AELRPHGIKV SAVIAGGMRT PFLLDRFPDI DVGNLQDPAN VAAAVRFVLL QPAETVIPEV MVLPMRETSW P
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