Gene Rpic12D_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3795 
Symbol 
ID8021482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp361289 
End bp362437 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID644832585 
Productcytochrome c oxidase subunit II 
Protein accessionYP_002983726 
Protein GI241665367 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTG CGATTGCGCT CTTGCTGATC GTCGTGCTGG CGGTGGGGTT TCACGTTGCC 
AGCCCGTGGT GGATCACGCC AATCGCCTCC AACTGGAGTC GCATGGACGA CACGCTGGCG
ATCACCCTCG TCATTACCGG TGTGTTGTTC ATCGCCATCA ATCTCTTCGT CGTGGCAGCG
CTCTGGCGCT ACCGCCACCG CGAAGGCCAC CGCGCCGCCT ACGAACCCCA CAACAAGCGC
CTGGAATGGT GGCTCGTCGG CATCACCACG GCGGGTGTCG CGGCGTTGCT GGCCCCCGGC
CTGTTCGTCT ATGCCGACTA CGTGCGCCCG CCGCCCAATG CGCTGCGGAT GGAAGTGCTC
GGCCAGCAGT GGCAATGGCG GTTCCGCTTT CCCGGCCCTG GCGGAAAGCT GGGCACGACC
GACGTGCGCT ACATCACCGA CGACAATCCG TTCGGCATGA ACCCCGCAGA CCCCAACGGG
CGCGACAACT ACCTCATTGA CACGCCCGAA CTGCATCTCC CGCTCAACCG CCCGATCCAG
GTGCTGGCGC GCTCGCGCGA CGTGCTGCAC GACTTCTATG TGCCGCCCTT CCGTGCCCGC
ATGAACATGG TGCCCGGCAT GGTCACGACG TTCTGGTTCA CACCCACCAA GGCGGGGCGC
TATGACATTC TCTGCGCGCA GCTTTGCGGC ATCGGTCACT CGAACATGCG CGGCGTGGTG
GTGGTGGAGG ATGAAGCTGC ATTCACCCGT TGGCTGGCGC GGCAAACGAC GTTCGAGCAG
AGCCTGCAGG CAAAGGTGCA AGCCACGCCG GCTGCGGCAG GCGGCAGCGC GCAGGCGTTG
GCGGACCAGG GCAAGGCGCT CGCGCAGGCG AAGGGCTGCG TCGCTTGTCA TAGCGTGAAC
GGCAACCCCG GTGTCGGCCC CACGTGGAAA GACCTGTACG GCTCCACGCA GACCATGGCC
GATGGCACAA CCGCCGTGGC TGACGAGGCC TATCTGCGCG CCTTCATTCG CGACCCCAAG
GCGCGCGTGG TCAAGGGCTT CGCACCGATC ATGCCGAACT TCAACCTGAG CGAGCAGGAG
TTGTCTGCGC TCATCGCTTA CATCAAGGCA CAGGGTGGCC CCGCGCCCGC CAGCGCGGCC
AAACCGTAG
 
Protein sequence
MALAIALLLI VVLAVGFHVA SPWWITPIAS NWSRMDDTLA ITLVITGVLF IAINLFVVAA 
LWRYRHREGH RAAYEPHNKR LEWWLVGITT AGVAALLAPG LFVYADYVRP PPNALRMEVL
GQQWQWRFRF PGPGGKLGTT DVRYITDDNP FGMNPADPNG RDNYLIDTPE LHLPLNRPIQ
VLARSRDVLH DFYVPPFRAR MNMVPGMVTT FWFTPTKAGR YDILCAQLCG IGHSNMRGVV
VVEDEAAFTR WLARQTTFEQ SLQAKVQATP AAAGGSAQAL ADQGKALAQA KGCVACHSVN
GNPGVGPTWK DLYGSTQTMA DGTTAVADEA YLRAFIRDPK ARVVKGFAPI MPNFNLSEQE
LSALIAYIKA QGGPAPASAA KP