| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3747 |
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| Symbol | |
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| ID | 8021434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 305103 |
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| End bp | 305867 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832537 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002983678 |
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| Protein GI | 241665319 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.191543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCAA CCCCATCTGC CATCGCACTG CGCCTGTCGG GCCGCACCGC CATCGTCACC
GGAGGCTCGC GCGGTATCGG CGCTGCGGTC GCGCGTCGTC TCGCGGCAGA TGGCGCACGC
GTGGCGGTGG TCTATCGCAG CAAGCAGGAA GAGGCGGACG CGGTGGTCCA GTCCATTCGC
GCAACGGGTG CGCACGCCAT TGCCGTGCAG GCCGATGTGA GCGACGCCGC GTCGGTCGAC
GCGATGACGG GCACCGTGCG CGAGGCCTTC GGCGCCATCG ACATCCTCGT CAACAACGCC
GGCATCCTGG AAAACCAACC GGTGGGCAGC ATCGATCTGG CCTCGTTCGA CGTGCAGTTC
CGGACCAACG CGTTCTCCAC CATTCTTGTC ACGCAGGCGG TCCTGCCGCA CGTGCCGGCG
CCCGGCGGGC GCATCGTCAA CGTGTCGTCC AGCCTCGTGT ATCGGCCGCG TGCCGGGCTG
GCGGTCTATG CGGCCAGCAA GGCCGCCGTG GGCGCGCTGA CGCATGCCTT TGCCGTGGAA
CTCGGACCTC GCAACATCAC CGTCAACGCC GTGGCACCGG CACTGACGCG CACCGACATG
ACGGCGCCGA TTCCCGATGA AGTGAAGGCC CGCATGCGCG ACTCGACGCC GCTCGGCCGC
CTCGCGGAGC CCGGGGACAT TGCCGACGCG GTGGCCTTCC TCGCCTCGGA CGATGCCCGC
TGGATCACCG GCCGCACGCT GATGACCGAC GGTGGCTTCA TCTGA
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| Protein sequence | MSPTPSAIAL RLSGRTAIVT GGSRGIGAAV ARRLAADGAR VAVVYRSKQE EADAVVQSIR
ATGAHAIAVQ ADVSDAASVD AMTGTVREAF GAIDILVNNA GILENQPVGS IDLASFDVQF
RTNAFSTILV TQAVLPHVPA PGGRIVNVSS SLVYRPRAGL AVYAASKAAV GALTHAFAVE
LGPRNITVNA VAPALTRTDM TAPIPDEVKA RMRDSTPLGR LAEPGDIADA VAFLASDDAR
WITGRTLMTD GGFI
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