Gene Rpic12D_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3741 
Symbol 
ID8021428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp298860 
End bp299399 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID644832531 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002983672 
Protein GI241665313 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC AACACGCGCT GCTCACATCC CTGCTTGAAA AGCCCTCGTC CGGCTACGAG 
CTTGCCCGCC GCTTTGACAA ATCGATGGGC TATTTCTGGA GCGCCACGCA TCAGCAGATC
TACCGCGAGC TTGGCCGCAT GGCAGAGGCC GGCTGGGTAA GCGCGGAAGA AGAGGAAGAC
AGCCGCAAGA AGACCTACAC CGTCTTGCCG CCCGGCCGGG ACGAGCTTGC GCGGTGGGTG
CTGGAGCCGA CGGTATCGTC GGACAACCGC GAAGAAGTGC TGGTGAAGCT GCGCGCCGAG
GCGGTGATCG GCCCGCTCGG TTTTGCCGAC GAGATGCAGC GTCTGATCAC GCAGCATCGC
ACGCGCCTGA ACACCTTCCG CGAGATCGAG CAACGCGATT TCTCCGGTGC GGATCTCACG
CGCGCGCAGC GGCTGCGGCA CGCGGTGCTT CAGCGCGGCA TCGTCTATGA AGAAGGCTGG
CTCGCGTGGG CAGGCGAAGT GCTGCCGTTG CTGGAGCCAG CCTCGGTAAC GACGGCCTGA
 
Protein sequence
MSIQHALLTS LLEKPSSGYE LARRFDKSMG YFWSATHQQI YRELGRMAEA GWVSAEEEED 
SRKKTYTVLP PGRDELARWV LEPTVSSDNR EEVLVKLRAE AVIGPLGFAD EMQRLITQHR
TRLNTFREIE QRDFSGADLT RAQRLRHAVL QRGIVYEEGW LAWAGEVLPL LEPASVTTA