Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3732 |
Symbol | |
ID | 8021419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 289632 |
End bp | 291983 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644832522 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_002983663 |
Protein GI | 241665304 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG ATCACGCCCC CTCCCTGCCT TCCCGCGACC ATGCCGCCAA GCCGGAAACG TCCGGCTGTG GTGGGTGCTG CGTCCACTAT CAGTTGGTTG CGACAGACAC CTCCCGTCAT GCTCATGACC ACGATCACAA CCACGCGCAC GAAGCGGATG CGCCTGTTGA TGCCGCCGCA CGCGCCAGGG CCAGCGGCCG CACGACCGTG CGCATCGAGC AGATGGACTG CCCGACCGAG GAGCGCATGA TCCGCACCAA GCTGGGCAGC GCCGAGGGTG TGGTCGCGCT GGAGTTCAAC CTGCTGGAGC GCCATCTCAC CATCCATCAC ACCGTAGATG ACGTGACGCC CTTCCTCGAA GCATTGCGCG CCATCGGCAT GGGTGGCGAG GTGCTGGAAG CGCACGATCG CGCTGCCGCC GCGCCTGCGG AACCTGCCGG CATCTCGCGC CGCACGTGGC TGCTGGGCGC GGGCGGCGTG GCCGCGTTTG GCGCCGAGGT CATCGCCTGG TCGCTGGGTG ATCATGCATG GCCGGTGCTG GCCTTGGCGC TGGCCTCCAT CGCGCTGGCC GGCGGCCCGA CGCTGCGCAA GGGCTGGATT GCCTTGCGCG CGCTCACGTT CAACATCAAC TTCCTGATGG CGGTGGCCGT GATCGGCGCG CTGCTGATCG GCAAGTGGGC CGAGGCGGCC ATGGTGATCT TCCTGTTTGC CGTGGCGGAG GCCATCGAGG CCCGTGCGCT CGTGCGCGCC CGCGATGCAG TGCGCGCGCT CACCGCCATT GCGCCCGACA CTGCAGAACT GGCTGACGGC AATGGCGGAT GGCGCGACGT GGCGGTTGAA GCAGTCGGCA TCGGCGCGCG CCTGCGTGTG CGGACGGGCA GCCGCGTGCC GGTCGACGCG CGCATTGTCA GCGGCCGTGC GGCGCTCGAC GAATCCCCCG TGACCGGCGA GAGCCTGCCA GTGGAGAAGA CCATTGGCGA CATCGTCCTC GCCGGCACCA TCGTCACCGA TGGCGTGATC GAGGCGCAGG CCACGGCCGT GGCGGCCGAC AGTACGCTTG CCCGTATTGC CGGCGCCATC CAGCAAGCGC AGGCGCAGCG CGCGCCCACG CAGCGCTTTG TCGACCGGTT TTCGTCCATC TACACGCCGG CGATGATGGT GCTGGCGCTG GCGGTTGCCG TCATCGGGCC GCTGGTCACT ACCGAAGGCT GGCTGGCGTG GACGTACCGC GCGCTCGTGC TGCTGGTGAT TGCCTGCCCG TGCGCGCTGG TCATTTCCAC ACCCGTGACG GTCGTGAGCG GCCTGGCTGC GGCTGCGCGG CGTGGCATCG TCGTCAAGGG TGGCGTCTAT CTGGAGAGTG GCAGGCGCCT GCGCGCGCTG GCGCTTGACA AGACCGGCAC GCTCACCACA GGGCGCCCCG TGCTTGACGC CGTGATGCTG CCGGACGGTT CGCGCCGAGC CGTCGCTGAA CTGCATGCAA CGACGGACGC GGCACACCTG CGCGCGCTTG CGGTGGCTGC AGCGCTGGAC GCCAACACGA CACACCCGAT TGCGGTGGCG ATCGTGCAGG CCGCAGCCGC ACACGGCGCG GTCGCGGCAG GCGCCATCCA AGACCTTTCC GTGCTGCCTG GTCATGGTGT GGCCGGCACG CTCGGCGGCG TGCGCTGGCA TCTTGGGAAC GCGGCCCTCG TGGCAGACCG CGGCTTCGAT ACGTCGGCCT GGCGCGCGGC GGCCGATCGG CTGCAGGCCG AGGGCATGTC CGCCGTCACG CTGTGCGATG CAGGCGGCGC CGTGGCCTTG TTCGGCGTGC GCGACCGCGA GCGCCCGGAA AGTGCCCAGG CCATCGCCGA TTTGCGCGCG CTGGGCGTGC TGCCTGTCAT GATTACCGGG GATGACCGCC GCGCGGCGCA GGCGATCGCC AGGACGGTCG GTATCGATCA GGTGCGCGCA GAACAGCTGC CCGAAGACAA GCAGCGCGTG GTTGGGGAAC TTGCCGCGCA GCATGGTTCC GTCGGCATGG TGGGCGATGG CATCAACGAC GCACCGGCGC TTGCGCGTGC CGATATTGGC TTTGCCATGG GCGCGGCCGG TACCGCAACG GCGCTCGAAG CCGCCGATGT CGCCATCATG GACGACGACC CGCGCAAGCT CGCGAGCTTC ATCCGCATCA GCCGTCGCAC GGTTGCGGTG CTGCGTCAGA ACATTGCCCT GGCGCTGGGC ATCAAGGCTG TGTTCCTCGC GCTCGCGGTG ATGGGCGAGG CTACGCTGTG GATGGCGATC TTCGCCGATG TGGGCGCAAG CCTGCTGGTC GTCTTCAACG GGCTGCGGGT GATGCGCACG CGCGCTGCGT GA
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Protein sequence | MKPDHAPSLP SRDHAAKPET SGCGGCCVHY QLVATDTSRH AHDHDHNHAH EADAPVDAAA RARASGRTTV RIEQMDCPTE ERMIRTKLGS AEGVVALEFN LLERHLTIHH TVDDVTPFLE ALRAIGMGGE VLEAHDRAAA APAEPAGISR RTWLLGAGGV AAFGAEVIAW SLGDHAWPVL ALALASIALA GGPTLRKGWI ALRALTFNIN FLMAVAVIGA LLIGKWAEAA MVIFLFAVAE AIEARALVRA RDAVRALTAI APDTAELADG NGGWRDVAVE AVGIGARLRV RTGSRVPVDA RIVSGRAALD ESPVTGESLP VEKTIGDIVL AGTIVTDGVI EAQATAVAAD STLARIAGAI QQAQAQRAPT QRFVDRFSSI YTPAMMVLAL AVAVIGPLVT TEGWLAWTYR ALVLLVIACP CALVISTPVT VVSGLAAAAR RGIVVKGGVY LESGRRLRAL ALDKTGTLTT GRPVLDAVML PDGSRRAVAE LHATTDAAHL RALAVAAALD ANTTHPIAVA IVQAAAAHGA VAAGAIQDLS VLPGHGVAGT LGGVRWHLGN AALVADRGFD TSAWRAAADR LQAEGMSAVT LCDAGGAVAL FGVRDRERPE SAQAIADLRA LGVLPVMITG DDRRAAQAIA RTVGIDQVRA EQLPEDKQRV VGELAAQHGS VGMVGDGIND APALARADIG FAMGAAGTAT ALEAADVAIM DDDPRKLASF IRISRRTVAV LRQNIALALG IKAVFLALAV MGEATLWMAI FADVGASLLV VFNGLRVMRT RAA
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