Gene Rpic12D_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3701 
Symbol 
ID8021388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp256299 
End bp257027 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID644832491 
ProductMethyltransferase type 11 
Protein accessionYP_002983632 
Protein GI241665273 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.260893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CGTCTACGCC TGCACATGTT GGTTCATTTA TTCCGGAAAC CGCATTTGGC 
GTCTGGTTTC TGCGCACGCA CACGTGGGAG CATCATGTAT TGCGTGTGGC CATCAACGAC
CTCAGGCGTC TGATCACAAC CCCGCTGCCC GCCGCACCCG TCATGGTGGA CGTGGGTTGT
GGGCAGGGCA TCTCGTTCCG CCTGCTGGAG CAAGCGTTTG CTCCGCAGCG CATCGTCGGT
GTGGACTGTC ACGCGCCATC CCTCGACGCG GCGCGTGAAG CCGCCCGCGC CATCGGTACA
CCAGTGGACA TCCTGCAGGG CGATTGTGCG GCACTGCCGC TGCCGGATGC GTGCGCCGAC
ATCGTGTTTT GCCATCAGAC GTTTCATCAT CTGGTCGAGC AGGAGCGCGC GCTGGCTGAG
TTTCACCGCG TATTGAAACC GGGCGGCTTG CTGCTGTTTG CCGAATCCAC GGATGCGTAT
ATCAAATCCT GGGTGATCCG CTTGCTGTTC CGGCATCCGA TGCATGTGCA GAAAAGCGCA
GACGGTTATC TGCAGATGCT GCGCGCGGGC GGCTTTCATT TCGAGCCGCG TCATGTTTCC
CTGCCGTATC TCTGGTGGAG CCGGGCAGCC GACTTTGGTT TGTTCGAGCG TCTGGGCCTG
CATCGTCCCA AGCCTGGCAA GCGGCGCGAG ACGCTGGTCA ACGTCGCCGC TGTCAAACCT
CTTGCCTGA
 
Protein sequence
METTSTPAHV GSFIPETAFG VWFLRTHTWE HHVLRVAIND LRRLITTPLP AAPVMVDVGC 
GQGISFRLLE QAFAPQRIVG VDCHAPSLDA AREAARAIGT PVDILQGDCA ALPLPDACAD
IVFCHQTFHH LVEQERALAE FHRVLKPGGL LLFAESTDAY IKSWVIRLLF RHPMHVQKSA
DGYLQMLRAG GFHFEPRHVS LPYLWWSRAA DFGLFERLGL HRPKPGKRRE TLVNVAAVKP
LA