Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3688 |
Symbol | |
ID | 8021375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 241976 |
End bp | 243649 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832478 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002983619 |
Protein GI | 241665260 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.458035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCC TGCGTGCACA GCTGCATGAG GCGCGGCCCG ATGATGCCGT GGTTTGCCTC GACGGTGCGG CAACGATGAC GTACGGGATG TTCCACGCTC GCGTGGCGGC CTACGCCGGA GCCTTTACAA CGCAGGCAAC GACGCACTAC GCGCTGTGCA TCGAGGATCC GTTCGATTTC GCCTGCGCGC TCTTTGCACT GTTTGCGAGC GGCAAGCACG TCGTGATTCC CGCCAGCGCG GCTCCGGCGT ATCTGGAATC GCTGGGTACC GCCTTTGACG CGCTCGTGAC CGACGCCAGC CTCCGCTCGA TCGATCAGCA CGCCGAAGCG GTCGTCGGGC CGATTCAACC GCTTGCGCCC ATCACCCTGT ACACCTCGGG CAGTACCGGC ACACCGAAGC CCATCCATAA GACGCTCGCG CAGTTCGATG CGGAAGTCGT GACCCTGGAG CAGCAATGGG GCAGGCAGAT CGGCGCTGGC GCCATGCTGG CCAGCGTACC GCATCACCAT ATCTACGGGC TGCTTTTCCG CGTGTTCTGG CCGCTGGCAG CCGGGCGTCC CTTCTGCCGT CAGACGCACG CGGAGCCCGC CGCCTTACAG CAAGCGCTTG CGCAACATCC GGTAGCGGCG TTGGTATCGA GCCCGGCGCA ACTGGCGCGC TGGCCGGTGC TGCCGCGCTT CGATGTGCTG CCGGCACTGC CGGCGGTGTT CTCATCTGGC GGCCCACTGG ATGCAACGGC CGCTGCCGCG TTTGCGGCCA CCCACGGCAG CGCGCCGATC GAAGTCTTCG GCAGCACTGA AACAGGTGGT ATCGCCTGGC GCCGCCAGGA CAGGACGCCT GCATGGCAGC CCTTTGCACG CGTGCAGATC CGCCAGGAAG ATGACGGTGC ACTGGCAGTG CGCTCGCCGC ACCTGCCGCA TGACAACTGG CATCGCACCG ACGACGCCAT CGCGTTCGAC GACAGCGGGC GCTTCCTCCT GCGCGGCCGG CTGGACCGCG TCGTCAAGGT GGACGGCAAG CGCATCGCCT TGCCTGAGGT CGAAGACTGG TTGGCCTCTC ACCCGTTTGT CGCCCGCGCG GCCGTCACGC TGCTGGCGGG TGCATCGCGA GAAAGGCTCG GCGCGCTGGT TGCGCTCACG CCGGCCGGCG TTGAAGGCTT GCGCACACTG GGCCGCGTAT CAGTGGCAAA GACACTGCGC CGGCATCTGT CGACCTATAC CGACCCCACG CTGATCCCCC GCCGCTGGCG CTTTTGCATG ACGATGCCGG TGGATGCACG GGGCAAGCTG CCGGCGTCGG TGATTGCCGC CGCCTTCCGG TCCGGCGTGG AAGGTTTCGA AACCCTGTCG CATGCCAGCG ATGCCGAGGG CGACCATTAC GAACTGCGCG TCAGCCCTGA CTTGATCCAC TTCAAGGGGC ACTTCCCCGG CCTGCCGATC CTTCCCGGCG TGGTGCTGAT CGACTGGATC GTTCGCCTCG CTGCGACACG CGATCGCGCG GTGCGCGCAA TGACCTCCAT CGATCAGCTC AAGTTCATGG CCCCGGTACC GCCGGGCGCG GTGGTGTCGC TGCGCATCGT GCATGAGTCG GAGCGTCGCC GCGTGCGCTT CACTGCCCGG ACGGGCGCGC GCGACTGCGC TTCTGGCACG CTGGTCTATC AGGAGGCTGC GTGA
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Protein sequence | MIALRAQLHE ARPDDAVVCL DGAATMTYGM FHARVAAYAG AFTTQATTHY ALCIEDPFDF ACALFALFAS GKHVVIPASA APAYLESLGT AFDALVTDAS LRSIDQHAEA VVGPIQPLAP ITLYTSGSTG TPKPIHKTLA QFDAEVVTLE QQWGRQIGAG AMLASVPHHH IYGLLFRVFW PLAAGRPFCR QTHAEPAALQ QALAQHPVAA LVSSPAQLAR WPVLPRFDVL PALPAVFSSG GPLDATAAAA FAATHGSAPI EVFGSTETGG IAWRRQDRTP AWQPFARVQI RQEDDGALAV RSPHLPHDNW HRTDDAIAFD DSGRFLLRGR LDRVVKVDGK RIALPEVEDW LASHPFVARA AVTLLAGASR ERLGALVALT PAGVEGLRTL GRVSVAKTLR RHLSTYTDPT LIPRRWRFCM TMPVDARGKL PASVIAAAFR SGVEGFETLS HASDAEGDHY ELRVSPDLIH FKGHFPGLPI LPGVVLIDWI VRLAATRDRA VRAMTSIDQL KFMAPVPPGA VVSLRIVHES ERRRVRFTAR TGARDCASGT LVYQEAA
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