Gene Rpic12D_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3578 
Symbol 
ID8021265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp126895 
End bp127566 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID644832369 
Productiron-sulfur cluster repair di-iron protein 
Protein accessionYP_002983510 
Protein GI241665151 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2846] Regulator of cell morphogenesis and NO signaling 
TIGRFAM ID[TIGR03652] iron-sulfur cluster repair di-iron protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.670531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAC TCGACCAGCC GCTGGGACAC TTGGCTCGCA ACATTCCGGG CGCCACCGGC 
ATCTTTCACG AATACCAGCT CGATTTCTGC TGCGGCGGCC AGCACAGCCT GCGTGAAGCG
GCACAGGCCA GAGGTATCGA CGCTGGGCCG ATCGCGGAAC GTCTGGAGGC ATTGAACGCA
GCGGTCACGC CCGATCAGGT CGTGGACTGG ACGACGGTGT CGCCCAGCAT GCTGATCGAC
CACATCGTCG AGCGTTTTCA CGATCGCCAC CGTGAGCAAT TACCCGAACT GATCCGCCTC
GCGCGCCGCG TTGAGCATGT CCATGGCGAC CGGGAGGATT GCCCGGTGGG CCTGGCCGAC
CTGCTCGACG GCATGCAGCA GGAACTGGAG AGCCACATGC AGAAGGAGGA GCAGATCCTG
TTTCCGATGC TGTCGCGTGG CCATGGTTCG CGGGCCGGTG GCCCCATCGC CGTGATGCGC
ATGGAGCACG ACCAGCACGG CGACGCCTTG CAGCAACTGA TGACGCTGAC CAACGACATC
ACCCTGCCGC GCGGGGCCTG CACCACGTGG CGGGCGCTCT ATCTGGGCTT GCGCGCGTTC
CGGGAAGACC TGATGGAGCA CATCCATCTG GAGAACAACG TTCTCTTCGA GGGTGCGGCC
GGGGCGGGTT GA
 
Protein sequence
MALLDQPLGH LARNIPGATG IFHEYQLDFC CGGQHSLREA AQARGIDAGP IAERLEALNA 
AVTPDQVVDW TTVSPSMLID HIVERFHDRH REQLPELIRL ARRVEHVHGD REDCPVGLAD
LLDGMQQELE SHMQKEEQIL FPMLSRGHGS RAGGPIAVMR MEHDQHGDAL QQLMTLTNDI
TLPRGACTTW RALYLGLRAF REDLMEHIHL ENNVLFEGAA GAG