| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3501 |
|---|
| Symbol | |
|---|
| ID | 8021187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 45876 |
|---|
| End bp | 46826 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644832293 |
|---|
| Product | response regulator receiver modulated CheW protein |
|---|
| Protein accession | YP_002983435 |
|---|
| Protein GI | 241665076 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.096074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.598076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGT CGCAGCACGA AGTCGATGAA CGGACCAATC TGACCAACAA CAACCGCTTC
GAACTGTTGC TGTTCCGCCT GGGTGAATCC GCACGCTCCA ACCAGCGCGA GATGTTCGGC
ATCAACGTGT TCAAGGTGCG CGAGATCATG GTCATGCCGC CCGTCACCCA TGTGGCGGAT
GCAGGCGCCC ATATCCTGGG CGCGGTGAAC GTGCGCGGTC AGATCATCCC CGTGATCGAT
TTGGCCAGCG TGATCGGCAC CAAGAACAGC AGCGCCAACA TTCTGCTGAT CACGGAATAC
GCGCGCACCA CGCAGGGCTT TGCGGTGGAA GAGGTCGATG AGATCGTGCG CCTGGAATGG
AGCCAGATTT TTCCGGCCGA GGCGAGCGTG GGCAGCAGCA ACATCACCAG CCTGGCTCGT
CTGGACGGCA ACGCCGACAA TTCGCGTCTG GCGCAGGTGA TCGACGTCGA GCAGATCCTG
GTGGACGTGT TCCCGACCCG CCGTGCCGAT CTGGCGCCGG ACAACGACGA GCGTCTGGTC
AAGATTCCGC CCGGCGCCAA ACTGCTGGTG GCGGATGATT CGGGGCTTGC CCGCTCCCTG
ATCGCCAACG GCCTGGAGGC GATGGGCGCA CCCTATGTCA TGACCAAGAG CGGCCAGGAG
GCATGGGACA CGCTGCAGAA GATCGCGCGT GACGCCGCCC GCGAAGGCAA GACCGTGCGC
GACAAGATCG CCCTGGTGCT GACCGACCTT GAAATGCCCG AGATGGATGG CTTTACGCTC
ACGCGCAAGA TCAAGTCCGA GCCGGCGTTC CAATCGATCC CGGTGGTGAT CCATTCATCG
CTGTCGGGCT CGGCCAATGA AGACCACGTA CGCCGCGTGG GCGCCAATGG CTATGTCGCC
AAGTTCGAAG CCAACGAACT CGCACAGGCG ATTGCCTCGG CGCTGGGCTG A
|
|---|
| Protein sequence | MTMSQHEVDE RTNLTNNNRF ELLLFRLGES ARSNQREMFG INVFKVREIM VMPPVTHVAD
AGAHILGAVN VRGQIIPVID LASVIGTKNS SANILLITEY ARTTQGFAVE EVDEIVRLEW
SQIFPAEASV GSSNITSLAR LDGNADNSRL AQVIDVEQIL VDVFPTRRAD LAPDNDERLV
KIPPGAKLLV ADDSGLARSL IANGLEAMGA PYVMTKSGQE AWDTLQKIAR DAAREGKTVR
DKIALVLTDL EMPEMDGFTL TRKIKSEPAF QSIPVVIHSS LSGSANEDHV RRVGANGYVA
KFEANELAQA IASALG
|
|---|
| |