| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3456 |
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| Symbol | trmE |
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| ID | 8021141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3643007 |
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| End bp | 3644452 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644832250 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002983392 |
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| Protein GI | 241665032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CTGACCAACC CACGGCCTTG CCGAACGCTT CCCCTGCGCC GCGCGCGCCC
ATCCTCACCA TCCCCATCGC CGCGATTGCC ACCGCGCCGG GGCGGGGCGG CATTGGCGTG
GTGCGCGTAT CGGGGCCCGA CGTGCGCGCC GTCATGCAAG CCGTGTGCGG ACGTGTGCTG
ACGCCACGCC AGGCAACCTA CCTGCCGTTC CTCGACGCCG AGGGTAATGC CATCGATCGG
GGCATCGCCC TGTGGTTTCC GGCGCCGCAT TCCTACACGG GCGAAGACGT GCTGGAGCTG
CAGGGCCACG GCGGCCCGGT GGTGATGCAA CTGCTGCTGC AACGCTGCCT GACCGCCGGC
CGCGAGATCG GCCTGCGCGT GGCCGAGCCC GGCGAGTTCA CGCGCCGCGC CTTCCTCAAC
GACAAGATGG ATCTGGCGCA GGCCGAGGCC GTCGCCGACC TGATCGAGGC GAGCACCGAA
GCTGCCGCAC GTTCAGCCGC GCGCTCGCTC GAGGGCGCGT TTTCTCAGGC AGTGCATGCG
TTGGTTGAGC GCGTGATCCA TCTGCGCATG CTGGTAGAAG CGACGCTGGA TTTTCCCGAG
GAGGAGATCG ACTTCCTGGA GGCGTCCGAC GCGCGGGGCC AGCTCGCCGG CATTCGCACG
GCCGTCGATG GCGTGCTCGC GCAGGCTCGT CAGGGGGCGC TGCTGCGCGA AGGCCTGCAC
GTGGTGCTGG CGGGGCAGCC GAATGTCGGC AAGTCGTCGT TGCTCAATGC GCTGGCCGGC
GCGGAACTTG CCATCGTCAC GCCGATTGCC GGCACCACGC GCGACAAGGT GCAGCAGACG
ATTCAGATTG AAGGCATCCC GCTGAACATC GTCGACACGG CGGGCTTACG CGATACGGAA
GACGAAGTCG AGCGCATCGG TATCGAGCGC ACCTGGGCCG CCATCGCCCG CGCCGATGTC
GTGTTGCATC TGCTGGACGC GACGGACTAT CGCGCCAAGG GCCTCTCGCC CGAAGACACC
GCAATCGACG CCCGCATTGC CGAACACGTG CCCGCCGGCG TACCGACCCT GCGCGTCATC
AACAAGATCG ACCTCTCGGG CGTAGCTATA CCGGGCCGCG TGGATGCCGA ACCGCCCGAG
GTGTGGCTCT CGGCGCGCGA TGGCCTGGGC GTCGAACTGC TGCGCGCGGC GTTGCTCGAG
ATTGCCGGCT GGCAGGGCGG CGGCGAGGGG CTTTACCTCG CCCGCGAGCG CCATCTCGCG
GCGCTGCGCA CGGCCCGCGA ACATCTCGCC ACGGCGGCGG AGCACGCGGC ACAGCAAGCG
CAATCGCTGG ATCTGTTTGC CGAGGAACTG CGGCTTGCGC AGGAGGCGTT GAACAGCATT
ACGGGGGCGT TCTCCAGCGA TGATTTGCTG GGGGTGATTT TTAGCCGGTT TTGCATCGGA
AAATAA
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| Protein sequence | MTAADQPTAL PNASPAPRAP ILTIPIAAIA TAPGRGGIGV VRVSGPDVRA VMQAVCGRVL
TPRQATYLPF LDAEGNAIDR GIALWFPAPH SYTGEDVLEL QGHGGPVVMQ LLLQRCLTAG
REIGLRVAEP GEFTRRAFLN DKMDLAQAEA VADLIEASTE AAARSAARSL EGAFSQAVHA
LVERVIHLRM LVEATLDFPE EEIDFLEASD ARGQLAGIRT AVDGVLAQAR QGALLREGLH
VVLAGQPNVG KSSLLNALAG AELAIVTPIA GTTRDKVQQT IQIEGIPLNI VDTAGLRDTE
DEVERIGIER TWAAIARADV VLHLLDATDY RAKGLSPEDT AIDARIAEHV PAGVPTLRVI
NKIDLSGVAI PGRVDAEPPE VWLSARDGLG VELLRAALLE IAGWQGGGEG LYLARERHLA
ALRTAREHLA TAAEHAAQQA QSLDLFAEEL RLAQEALNSI TGAFSSDDLL GVIFSRFCIG
K
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