Gene Rpic12D_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3389 
Symbol 
ID8021074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3578877 
End bp3580223 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID644832183 
Producthistidine kinase 
Protein accessionYP_002983325 
Protein GI241664965 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCA CCCTGTCTCT CGCCGCCCCG CTGCTGGATG CCTCCAGTCT ACGCCGCCTG 
TTTTGGCTGC GATGGAGCCT GCTGGCCACC CAACTGGTGC TGATGCTGCT CGCGCCGCTG
GTATTTGGCG TGCAACTGCC GGTGGTGCCG CTGCTGAGCG TGATGGGCCT GCACGCGCTA
TTCAACCTGC TGACCGGATG GCGGGTGCGG CGCAACCGGC CCGTGCAGCA TATCGAGATC
ACCGTTCAAC TGCTGGTGGA CCTGACCGCG CTGTCCGCCC TGCTGTATTT CACAGGTGGC
GCGACCAACC CGTTTGTCTC GTTCTATCTG CCGGCGCTGG CGATTGCCGC CGCCATGCTG
CCGATCGCAC ACGTGGTCGG CCTGACGCTG TACGCCCTGG CCGCCTATAG CATGATGCTC
GGCAACTACA TCCCGCTGAA GCTGGCGAAC CAGGCCGATG CATTGGCCTA TCACCTGGCC
GGCATGTGGA TCGATTTTGT GGCCAGCAGC GCGATGATCG CCGGCTTTAC GGCGCGCCTG
TCCGCCGCCC TGCGCGAGAG CGATGCACAG CTGACCGAAG CGCGCGAGCG GCTGCTGCGC
GAGCAACGCA TCGAAGCTCT GATGTCGCAA GGCGCGAGCG TGGCGCATGA AATGGGCACG
CCGCTGTCTA CCGTGGCCGT CATCACCGGC GAACTGCAGC ACGACGCGAA GCAGCCCGAC
TCCCCACTGG CTCCGTACCG TGAAGACCTG CGCGCCATCG AACAGCAGCT CGAGCTGTGC
CGCGCCGCGC TGGCGCGACT GCAGAGCAAA CCCAACGACG GCGCGCCGGA GCCGCTCGGC
CAATGGCTAC CGGGTTTTAC GCAGACGTGG CAGCTTCGCC ATCCGGATAT CCGCCTCCAC
ACGGAGGCGT CGCCCGCGGC ACAGGCGGTG GAATTGGATG CGGTGAACGT CGGTCAGATT
CTCACCATCC TGCTCGACAA CGCTGCCCGC AGCCAGCACC ACGCCGGGCG CGACCTGGTG
CCGCTGCTGC TGACCGCTAG GATCGACGCC AACCCCGATA CGCCACGCGA TATGCCCCCG
CAGATCGTGC TGTCCATCGT CGATACGGGG TTGGGCTTGC CTGAAGACCT GCGCGCCTCG
CTTGGCCGCA CGCCGGTGCC AAGCCGGCAC GGCGGACGCG GCATCGGGCT GTACCTGGCC
TCCACCACGG CGCGCCGGCT GGGTGGTACC GTGACGCTGC GCCCGAACCC GCCGCAAGGC
GCCATTGCCG AACTCCGCCT GCCGATCGGT GGTCCGACAG AACACCCGGC CGCTCCCATC
ATGGGCGCGC CCACCCTCTT TACATAA
 
Protein sequence
MLSTLSLAAP LLDASSLRRL FWLRWSLLAT QLVLMLLAPL VFGVQLPVVP LLSVMGLHAL 
FNLLTGWRVR RNRPVQHIEI TVQLLVDLTA LSALLYFTGG ATNPFVSFYL PALAIAAAML
PIAHVVGLTL YALAAYSMML GNYIPLKLAN QADALAYHLA GMWIDFVASS AMIAGFTARL
SAALRESDAQ LTEARERLLR EQRIEALMSQ GASVAHEMGT PLSTVAVITG ELQHDAKQPD
SPLAPYREDL RAIEQQLELC RAALARLQSK PNDGAPEPLG QWLPGFTQTW QLRHPDIRLH
TEASPAAQAV ELDAVNVGQI LTILLDNAAR SQHHAGRDLV PLLLTARIDA NPDTPRDMPP
QIVLSIVDTG LGLPEDLRAS LGRTPVPSRH GGRGIGLYLA STTARRLGGT VTLRPNPPQG
AIAELRLPIG GPTEHPAAPI MGAPTLFT