Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3374 |
Symbol | xerC |
ID | 8021059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3563657 |
End bp | 3564643 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832168 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002983310 |
Protein GI | 241664950 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAT CTGCATCCGC CGATGACCAT GGCGCTCAAG CGCCGCATCC GCAGATTGCG GCGTACCTGG ACGCGCTGAG GTTCGAGCGG CAGCTCTCGC CGCATACGCT GGAGAGCTAC ACCCGCGAGC TGGCCGTGCT GCAGCGCCTC GGTGCGCAGC ACGCCGCCAA TATCGACCTA ACGCAGCTGC AGTCGCACCA CATTCGCCGC ATGATGGCGC AACTGCATGG CGACGGCTTG TCGGGACGCA GCATTGCGCG GGCGCTGTCC GCGTGGCGCG GCTGGTTCAA ATGGATGGCG CTGCGCGATG CCGCCGTCAC CGCCAACCCG GTCGATGGCG TACGCGCCCC GAAGAGCCCG AAGCGACTGC CGAAAGCGTT GTCCGTCGAG CAGGCTGTCG CGCTGATGGA GCAACTGCCT GGCGACGATC CCGAGACGGT GCGCGATCGC GCTGTCAACG AGTTGTTCTA TTCGTGTGGC TTGCGGCTCT CCGAACTCGT CAGCCTGGAT ATGCGACACG TGAAGGCCGG CGCGTATGAA TCGGCGAGCT GGCTCGACCT CGAGGCGCGC GAGGTGCAGG TGCTTGGTAA AGGCAGCAAG CGGCGCACCG TGCCGGTGGG CACCAAGGCG GCGCAAGCGC TGGCTGCATG GCTGGCGGTG CGCGCGCAGC TTGCCAAGCC AGACGCGGCA CCCGAAGACG CGCACGCGCT GTTTCTCTCG CCGCGCGGCA AGCGGCTGGC GCAGCGGCAG ATTCAATTGC GCATGAAGCG CAACGCCATC GCGGCGGGTG TTCCGGCGGA TGTGCACCCG CACGTGCTGC GGCATTCGTT TGCCACGCAC ATGCTGCAGT CATCGGGCGA TTTGCGCGCG GTGCAGGAAC TGCTCGGCCA CGCCAGTATT GCCAGCACGC AGGTTTATAC TTCGCTCGAT TTTCAGCACC TGGCCAAGAT CTACGATCAG GCGCATCCCC GCGCAAAAAA GAAGTAG
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Protein sequence | MPQSASADDH GAQAPHPQIA AYLDALRFER QLSPHTLESY TRELAVLQRL GAQHAANIDL TQLQSHHIRR MMAQLHGDGL SGRSIARALS AWRGWFKWMA LRDAAVTANP VDGVRAPKSP KRLPKALSVE QAVALMEQLP GDDPETVRDR AVNELFYSCG LRLSELVSLD MRHVKAGAYE SASWLDLEAR EVQVLGKGSK RRTVPVGTKA AQALAAWLAV RAQLAKPDAA PEDAHALFLS PRGKRLAQRQ IQLRMKRNAI AAGVPADVHP HVLRHSFATH MLQSSGDLRA VQELLGHASI ASTQVYTSLD FQHLAKIYDQ AHPRAKKK
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