Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3365 |
Symbol | |
ID | 8021050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3554657 |
End bp | 3555169 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832159 |
Product | rod shape-determining protein MreD |
Protein accession | YP_002983301 |
Protein GI | 241664941 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTCGC CCCAATACCT GCTGCGCCCG GTCAATCCTG GCTTCATCGC GTTCAGCTTC GTGCTGGCGT TCCTGTTCAA CCTGATGCCG TGGGGCCACA TGCAGTGGAT TCCCGATCTG GTGGCGCTGG TGCTGGTGTT CTGGAACATC CATCAGCCGC GCCGCGTGGG CATGGTGGTG GCCTTCCTGC TGGGCCTCCT GATGGACGTG CACGAAGCGC GTCTGCTTGG CGAACACGCG ATGGCCTACA CGATGCTGTC GTATTTTGCG ATCACGATTC ACCGGCGCGT GCTGTGGTTT TCGGTGCTGT CGCAGGCGCT GCACGTGCTG CCGCTGCTGG TGCTGGCGCA CGCCGTACCG ATCGTCATCC GTCTGCTGAT GGGCGCGCAC CTGCCGGACT GGCAGGTCAT CCTGCCGCCG CTGATCGAAG CCGCCCTGTG GCCGTTCGCC AACGCCTTCC TGCTGGCGCC GCAGCGTCGC CCGGAGAGCG TCGACGAAAC CCGGCCCATC TAA
|
Protein sequence | MNSPQYLLRP VNPGFIAFSF VLAFLFNLMP WGHMQWIPDL VALVLVFWNI HQPRRVGMVV AFLLGLLMDV HEARLLGEHA MAYTMLSYFA ITIHRRVLWF SVLSQALHVL PLLVLAHAVP IVIRLLMGAH LPDWQVILPP LIEAALWPFA NAFLLAPQRR PESVDETRPI
|
| |