Gene Rpic12D_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3365 
Symbol 
ID8021050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3554657 
End bp3555169 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID644832159 
Productrod shape-determining protein MreD 
Protein accessionYP_002983301 
Protein GI241664941 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGC CCCAATACCT GCTGCGCCCG GTCAATCCTG GCTTCATCGC GTTCAGCTTC 
GTGCTGGCGT TCCTGTTCAA CCTGATGCCG TGGGGCCACA TGCAGTGGAT TCCCGATCTG
GTGGCGCTGG TGCTGGTGTT CTGGAACATC CATCAGCCGC GCCGCGTGGG CATGGTGGTG
GCCTTCCTGC TGGGCCTCCT GATGGACGTG CACGAAGCGC GTCTGCTTGG CGAACACGCG
ATGGCCTACA CGATGCTGTC GTATTTTGCG ATCACGATTC ACCGGCGCGT GCTGTGGTTT
TCGGTGCTGT CGCAGGCGCT GCACGTGCTG CCGCTGCTGG TGCTGGCGCA CGCCGTACCG
ATCGTCATCC GTCTGCTGAT GGGCGCGCAC CTGCCGGACT GGCAGGTCAT CCTGCCGCCG
CTGATCGAAG CCGCCCTGTG GCCGTTCGCC AACGCCTTCC TGCTGGCGCC GCAGCGTCGC
CCGGAGAGCG TCGACGAAAC CCGGCCCATC TAA
 
Protein sequence
MNSPQYLLRP VNPGFIAFSF VLAFLFNLMP WGHMQWIPDL VALVLVFWNI HQPRRVGMVV 
AFLLGLLMDV HEARLLGEHA MAYTMLSYFA ITIHRRVLWF SVLSQALHVL PLLVLAHAVP
IVIRLLMGAH LPDWQVILPP LIEAALWPFA NAFLLAPQRR PESVDETRPI