Gene Rpic12D_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3364 
Symbol 
ID8021049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3552209 
End bp3554614 
Gene Length2406 bp 
Protein Length801 aa 
Translation table11 
GC content66% 
IMG OID644832158 
Productpenicillin-binding protein 2 
Protein accessionYP_002983300 
Protein GI241664940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA TCCGCAACGT CGAACAGGAG CTGTCGCGCT TCCGCCTGCG GCTGGCGGCG 
GCCGCCCTGT TCGTGCTCGT CTGCTTCGGG CTGCTGCTGG CGCGCTTCTT CTGGCTGCAG
CAGGTCAAGC ACGAGCAGTA CTCGGCCAAG GCGGAAGACA ACCGCATTTC GGTCGCGCCC
ATCGAGCCCA ACCGCGGCAT CATCATGGAC CGCAACGGCG TGGTGCTGGC GCGCAACTAT
TCTGCCTACA CGCTGGAGAT CACGCCTTCC AAGCTGCAGG ACACGCTCGA TAACACGATC
GACCAGCTTG CCCAGGTGGT CGATATCCAG CCGCGCGACC GCCGTCGCTT CAAGCGCCTG
ATGGAAGATG CGCGCAGCTT CGAGAGCCTG CCGATCCGCA GTCAGCTGAC GGACCAGGAA
GTCGCGCGCT TTTCGGCGCA GCGCTTCCGC TTTCCGGGTG TGGACGTGCA TGCGCGGCTG
TTCCGCCAAT ACCCGCTGGG CGACTCGGCG TCGCACGTGA TCGGCTACAT CGGCCGCATC
TCCGAGCGCG ATCTGGACCG CATCGACAAT ATGAGCGATG CCAACAGCCA GCCCGGCGTG
GCGTACGACC CGCGCAAGGA TTCGAACAAC TACAGCGGCA CGGAATACAT CGGCAAGGTC
GGCATCGAGC AGAGCTACGA AACCGAACTG CACGGCCTGA CGGGCTACGA AGAGGTGGAA
GTCAGCGCGG GCGGCCGGCC GATCCGCACG CTGTCGACCT CGCAGGCAAC GCCGGGCAAC
AACCTGATCC TGTCGCTCGA CATCAACCTG CAGCGGCTGG CCGAACAGCT CTTCGGCAAC
CGGCGCGGCG CCCTCGTGGC GATCGAGCCG GAGACGGGCG ACATCCTCGC CTTCGTCTCC
AAGCCGACGT TCGATCCGAA CCTGTTCATT GAAGGGATCG ACAGCGCGAC CTGGAATGAG
CTGAACAACT CGCCGGACAA GCCGCTGCTG AACCGCCCGC TGCGCGGCAC GTATCCGCCG
GGCTCGACGT ACAAGCCGTT CATGGCGCTG GGCGCGCTGG AGCTGGGCAA GCGCACGCCG
CAGTGGGGCA TGGCTGATCC GGGCTCGTTC ACGCTCGGCA ACCACACCTT CCGCGACGAC
GTGCCGGGCG GGCACGGCTG GGTCGACATG TACCGCTCCA TCGTGGCGTC GTGCGACACG
TATTACTACC GGCTCGCCAA CGACATGGGC GTCAATGCCA TCCACGATTT CATGAAGCCG
TTCGGCTTCG GGCAGGTCAC GGGCATCGAC ATCGAAGGCG AGCGCACAGG CATCCTGCCC
TCCACGGACT GGAAGCGCAA AGCCTATAAG CGCCCGGAAC AGCAGAAGTG GTACGACGGC
GAAACCATCT CGCTGGGCAT CGGCCAGGGC TACAACAACT TCACCATCCT GCAGCTCGCG
CATGCGATTT CGACGCTGGC CAACAATGGC GTGGTGATGA AGCCCCACCT GGTGAAGGCG
GTTGAAGATT CGCTGTCCAA GTCGCGCGCG CTGACGGTGC CGACGGAGAG CTATCGCATT
CCGCTCAAGC AGGCCAACAT CGACGTGATC AAGCGCGCCA TGGTGGGCGT GAACCAGGCC
GGTACGGCGG CAAAGGCGTT CATCGGCGCG CAATACGTGT CGGCGGGCAA GACCGGTACG
GCGCAGGTGT ACTCGCTGGG CAAGAACGAG AAGTACAACC ACCACGCCAT TCCCGAGAAC
AAGCGCGATC ATGCGCTGTT CGAGGCTTTC GCACCGGCGG ACCATCCGAA GATCGCGCTG
GCGCTGATCG TGGAAAATGC CGGCTTTGGT GCCGCATCGG CCGCACCCAT CGCACGTGCG
GTCATGGACT ATTACCTGAC CGGCAGGTGG CCTGCGGAAC TGGCCGCCAC CGCGCCGAAG
CCCCAGCAGC AACCGCCGGT GGATACGCCC AGCGTGTTCT CGACCGGCAA GACGGCCACC
ATCGCCAGCG CGACGGCTGC GCCGCAGGTG ACCGCAGAGC CGGCATCCGG GGTCGCTGCT
GCTTCGGGCG TGGCAGCCTC CGCCGCCAGT GCGGTGGCCG CCGCTTCGGC GCCCGCCGCA
TCGTCGGTGG CAGGGGGCAC CACACGCAGT GTGCCGCCGC TGTCGCCGGA CCTGGTGGCC
CCTGCCCTGC GCGAGGCTGG CACCAGCGCC GAAGCCGTCG CCCCGGCCAC CCTGGACGCC
CAGGTGCTGC AAGCGCTGTC GCATGCACAA CCGGCGCCCG AACTGCCACC GCGCGGACGG
GGCAACGCTG CCGCACCGGC TTCGGCTCCA GCGACCACAC CAAAGGGTGC GAAGGACACC
AAGCCGGGCA ACAAGCCGGC ACCGAAGCCC GCGCAGAAAC CGGCCTCCAA GCCGGCCGCG
CCCTGA
 
Protein sequence
MTEIRNVEQE LSRFRLRLAA AALFVLVCFG LLLARFFWLQ QVKHEQYSAK AEDNRISVAP 
IEPNRGIIMD RNGVVLARNY SAYTLEITPS KLQDTLDNTI DQLAQVVDIQ PRDRRRFKRL
MEDARSFESL PIRSQLTDQE VARFSAQRFR FPGVDVHARL FRQYPLGDSA SHVIGYIGRI
SERDLDRIDN MSDANSQPGV AYDPRKDSNN YSGTEYIGKV GIEQSYETEL HGLTGYEEVE
VSAGGRPIRT LSTSQATPGN NLILSLDINL QRLAEQLFGN RRGALVAIEP ETGDILAFVS
KPTFDPNLFI EGIDSATWNE LNNSPDKPLL NRPLRGTYPP GSTYKPFMAL GALELGKRTP
QWGMADPGSF TLGNHTFRDD VPGGHGWVDM YRSIVASCDT YYYRLANDMG VNAIHDFMKP
FGFGQVTGID IEGERTGILP STDWKRKAYK RPEQQKWYDG ETISLGIGQG YNNFTILQLA
HAISTLANNG VVMKPHLVKA VEDSLSKSRA LTVPTESYRI PLKQANIDVI KRAMVGVNQA
GTAAKAFIGA QYVSAGKTGT AQVYSLGKNE KYNHHAIPEN KRDHALFEAF APADHPKIAL
ALIVENAGFG AASAAPIARA VMDYYLTGRW PAELAATAPK PQQQPPVDTP SVFSTGKTAT
IASATAAPQV TAEPASGVAA ASGVAASAAS AVAAASAPAA SSVAGGTTRS VPPLSPDLVA
PALREAGTSA EAVAPATLDA QVLQALSHAQ PAPELPPRGR GNAAAPASAP ATTPKGAKDT
KPGNKPAPKP AQKPASKPAA P