| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3357 |
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| Symbol | |
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| ID | 8021042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3542190 |
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| End bp | 3543284 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644832151 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002983293 |
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| Protein GI | 241664933 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.695863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACCG CCCACGCCGC CGAGCGCACT GTGACGCCGG CGCAACAGGC GCAGGCTGTG
ACCGCTGCTC AAGCGGGCAT CCCTGAGGCC GAACTGTCCG CCACCGCGCC AGCGCAGTAC
ACCGTGCGCC GTGGTGACAC GCTCTGGGCG ATCTCGGGCA AGTACCTGAA GCGGCCTTAT
CGCTGGCCCG AGCTGTGGGG CATGAACCGC GAGCAGATCC GCAACCCGCA TCTGATCTAC
CCGGGCCAGA TCCTGTATCT GCATCACGCG AATGGCCGCG CATGGCTGTC GAGTTCCCCG
GCATCGGCGG ATGGCAGCAC GGTGCGCCTG TCGCCGCATA CCCGCGTGTC GGGGCAGGAC
GGTGACGCCA TCTCCAGCAT TCCCGCGGCC GCCATCGAGC CGTTCCTGAC CCAGCCGATC
GTGGTGGATG AAGACACGCT GGCCACGCCG GCGCGCATCT TTTCGCTGCC TGAAGGCCGC
GTTTATCTTG GCAAGGGCGA GAACGCCTAT GCCCGCGGCC TGCCGCAGGG CGAAGGCGGC
CAGGCCGGTA CCGAATGGCA GGCGTATCGC CCAGTCCGTC CGCTCAAGGA TCCGGTGACG
GGCAACGTGC TCGGCTATGA AGCCGACTTC CTCGGTACGC TGCGCGTGGT GCGCGCGGCG
ACCGGTCCGC AGGCGGTGAC CAAGATGGAA GTGCTGTCGT CCAAGGAAGA AATGGGCGTC
GGCTCGCAAC TGATGCCATT GCCCCCGCGC GTGCCGGTGC GCTATGTGCC GCATGCGCCG
GAAGGCGACA TGCACGGCGC GGTCGCCAAG GTGACCGGCG GCGTACGCTT TGGCGGTACC
GACCAGGTGG TTGTGCTGAA CATCGGCAGC CAGCAGGGGC TGGAGCCGGG TCACGTGCTG
TCGCTGGCAC GCGCCGGCGC CGTCGTGAAG GACGCGACGG CCGGCAACGA AGCCGTGCAG
CTGCCCGCAG AGCGCTATGG CCTGGCCTTC GTGTTCCGCG TGTTCCCGCA CGTGGCCTAT
GCGCTGGTGA CGGACGCGTC GAACGCCGTG GAAGTGGGCG ACAGTGTCAG CAACCCGATG
TCGCAGCAAC CTTGA
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| Protein sequence | MGTAHAAERT VTPAQQAQAV TAAQAGIPEA ELSATAPAQY TVRRGDTLWA ISGKYLKRPY
RWPELWGMNR EQIRNPHLIY PGQILYLHHA NGRAWLSSSP ASADGSTVRL SPHTRVSGQD
GDAISSIPAA AIEPFLTQPI VVDEDTLATP ARIFSLPEGR VYLGKGENAY ARGLPQGEGG
QAGTEWQAYR PVRPLKDPVT GNVLGYEADF LGTLRVVRAA TGPQAVTKME VLSSKEEMGV
GSQLMPLPPR VPVRYVPHAP EGDMHGAVAK VTGGVRFGGT DQVVVLNIGS QQGLEPGHVL
SLARAGAVVK DATAGNEAVQ LPAERYGLAF VFRVFPHVAY ALVTDASNAV EVGDSVSNPM
SQQP
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