Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3354 |
Symbol | fmt |
ID | 8021039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3538254 |
End bp | 3539237 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644832148 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_002983290 |
Protein GI | 241664930 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCCA CCCTTCGCGT AGCGTTTGCC GGCACGCCTG AATTTGCGCA GATTGCCCTG GCGGCGATCC ACCAGGCCGG CTTTCCCGTC GTTGCCGTGC TGAGTCAGCC AGATCGTCCA GCCGGACGCG GCATGCAATT GCAGGCAAGC CCCGTCAAGC AGTACGCCGT CACGCATGGG TTCGCGCCGA TCCTGCAGCC GCCGTCGCTG CGCCGCGCAG GCAAATATCC GCAAGAAGCC GCGGAAGTCA TCGACGCCCT GGCCGCCCAG CGTCCTGACG TGATGGTCGT CGCAGCCTAC GGCCTGATCC TGCCGCAGGA AGTGCTCGAC CTGCCGCGCT TTGGCTGCAT CAACATCCAC GCGTCGCTGC TGCCGCGCTG GCGTGGCGCC GCGCCCATCC ACCGTGCAAT CGAAGCGGGC GACGCCGAAT CGGGCATCAC GCTCATGCAG ATGGATGCGG GTCTGGACAC CGGCGACATG ATCGCCATGG AGCGCGTGCC CATCGGCCTG ACCGACACGA CCGGCACGCT GCACGACACG CTGGCCGCGC TCGGCGGACG CATGGTGGTT GAGGCGCTCG CCAAGCTGGC GCAGTACGGC AAGCTCCACG CCACGCCGCA GCCGGCCGAA GGCATCACGT ACGCGGAGAA GATCGCCAAG GACGAAGCCG CGCTCGACTG GTCGCGCCAC GCCGCCGCGC TGCTGCGCCA GGTGCATGCG TTCAATCCGT TTCCTGGCGC ATCGGCCGCG CTGGATGGCG TGGCGATCAA GTTCTGGCAG GCGGAGGCGC TGGCCGATCG CCCGGCTGAG GCGGAACCCG GCACGGTACT CGCCGCCAAT GCCGAGGGCG TCACCATCGC CTGCGGCGCC GGCGCGCTAC GCGTGACGCA ACTGCAAAAG CCAGGCGGCA AGCGCCTGCC CGCACGCGAA TTCCTGCAAG GCCTCGCGAT CCAGCCCGGC CAGCGCTTCG CATCGCGCGG CTAA
|
Protein sequence | MTSTLRVAFA GTPEFAQIAL AAIHQAGFPV VAVLSQPDRP AGRGMQLQAS PVKQYAVTHG FAPILQPPSL RRAGKYPQEA AEVIDALAAQ RPDVMVVAAY GLILPQEVLD LPRFGCINIH ASLLPRWRGA APIHRAIEAG DAESGITLMQ MDAGLDTGDM IAMERVPIGL TDTTGTLHDT LAALGGRMVV EALAKLAQYG KLHATPQPAE GITYAEKIAK DEAALDWSRH AAALLRQVHA FNPFPGASAA LDGVAIKFWQ AEALADRPAE AEPGTVLAAN AEGVTIACGA GALRVTQLQK PGGKRLPARE FLQGLAIQPG QRFASRG
|
| |