| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3328 |
|---|
| Symbol | |
|---|
| ID | 8021012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3510056 |
|---|
| End bp | 3510967 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644832121 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_002983264 |
|---|
| Protein GI | 241664904 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00687] pyridoxal kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA CCGACCCGAC CCTCGCTGCG TTTGCCGCTC CCGCCTCGCA CGTACCGCGC
GTGCTCACCA TCGCCGGTTC GGACAGCGGT GGCGGTGCGG GCATCCAGGC TGACCTGAAG
ACGTTTGCCG CGCTAGGCTG CTACGGCATG TCAGCCATCA CGGCCATCAC CGCGCAGAAC
ACGCTGGGCG TGACCGCAGT GGAATCGCTC ACCCCCGACA TCGTGGCCGC GCAGATCGAC
GCCGTGGCAA GTGACATCGG GGTGGATGCC GCCAAGACCG GCATGCTGGG CACGCCGCAG
GTGGTAGAGG CCATCCTCTC TGCGCTGGAC CGTCACCCGA TCGCCAATCT CGTCGTCGAT
CCGGTCATGG TCAGCACCAG CGGCGCGCAA CTCGGCAGCG ATGCCACGGC ACAGGCGATG
GCGAAGTGGT TGTTCCCGCG CGCGCTGCTC GTCACGCCCA ACCTGCCGGA AGCCAGCGCG
CTGCTCGGCC GTGAGGTGCG CACGGCCGAC GACATGCTGC CCGCCGCGCG CGACCTGCTG
GCGCTCGGTC CCCGCGCCGT GCTGCTCAAG GGTGGGCATC TGAGCGCCGC TTCCAACGCA
GGCGAAGACG GCGTGCTGCA AGACGTGCTT GTCACCGCCG ATGGCACCGA ACGCGTCTAC
GCCCATACCT ACATCGACAC GCCGCACACG CACGGCACGG GCTGCACGCT GTCCGCCGCC
ATTGCCGCCC ACCTGGCGCG CGGCGATGCG CTGGAAGTCG CCATCGAAGC CTCGCTCGAT
TACCTGCTGC ACGCAATCGG CGCGGGCCGG CACCTGGCCC TCGGGCGGGG GGCGGGTCCG
TTGAACCACG GGTTCGCGCC GCGGCCGCTC GCAGCGCCGC GTTCGCTCGA CGTGGATGTC
GAGGAAGACT GA
|
|---|
| Protein sequence | MTITDPTLAA FAAPASHVPR VLTIAGSDSG GGAGIQADLK TFAALGCYGM SAITAITAQN
TLGVTAVESL TPDIVAAQID AVASDIGVDA AKTGMLGTPQ VVEAILSALD RHPIANLVVD
PVMVSTSGAQ LGSDATAQAM AKWLFPRALL VTPNLPEASA LLGREVRTAD DMLPAARDLL
ALGPRAVLLK GGHLSAASNA GEDGVLQDVL VTADGTERVY AHTYIDTPHT HGTGCTLSAA
IAAHLARGDA LEVAIEASLD YLLHAIGAGR HLALGRGAGP LNHGFAPRPL AAPRSLDVDV
EED
|
|---|
| |