| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3318 |
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| Symbol | |
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| ID | 8021002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3497808 |
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| End bp | 3499715 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832111 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002983254 |
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| Protein GI | 241664894 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAG CCAAAAACGC CCCCGCCGCA TCGTTCGACT CGCTGCAGTC CGAGCTCGAC
CAGAAGTTCG CCTATCCGGC CTCCAGCAAG ACGTACATCG TCGGCAGCCG CCCGGACATC
CGCGTGCCGA TGCGCACCAT CAAGCAGACC GCCACGCGCA CCGACAAGGG CGAGATGCTG
AACCCGCCGG TGCCGGTGTA CGACACCTCG GGCCCGTACT CCGATCCGGA CGTACACATT
GACCTGAAGG CTGGCCTCGC CCCGCTGCGC GCCAAGTGGA TCGACGAGCG TGGCGATACG
GAAATCCTCT CGGGGCTGTC GTCCGAATAC GGCCAGACGC GCGCCAACGA CCCGGCCACG
GCGCACCTGC GCTTCTCGCA CATCTCCAAG CCGCGCCGCG CCAAGGCCGG CGCCAACGTG
AGCCAGATGC ACTACGCGCG CCGCGGCATC ATCACGCCCG AGATGGAATA CGTCGCGCTG
CGCGAATCGC TGAACCTGCA GGCGCTGCAA GACAAGCCCG AGTACCGGCA ACTGCTCAAG
CAGCATCCGG GCTTCTCGTA CGGCGCGAAC CTGCCGCAGC GCCCGGAAGA CATCACGCCG
GAATTCGTCC GTGCCGAAGT CGCCGCGGGC CGCGCGATCA TCCCCGCCAA CATCAACCAT
ACCGAGCTGG AGCCGATGGC CATCGGCCGC AACTTCCGCG TGAAGATCAA CGGCAACCTC
GGCAACTCGG CGGTCACGTC GTCGCTGGCC GAGGAAGTGG AAAAGATGGT GTGGGCGATC
CGCTGGGGCG CCGACACGAT CATGGATTTG TCCACCGGCA AGCACATTCA CGAGACGCGC
GAATGGATCC TGCGCAACTC GCCGGTGCCC ATCGGCACGG TGCCCATCTA CCAGGCGCTG
GACAAGACCG GCGGCGTGGC TGAAGACCTG ACGTGGGAGA TGTTCCGCGA CACGCTGATC
GAGCAAGCCG AGCAAGGCGT GGACTACTTC ACCATCCACG CCGGCGTGCT GCTGCGCTAC
GTGCCGCTCA CGGCCGACCG CATCACGGGC ATCGTCTCGC GCGGTGGTTC GATCATGGCC
AAGTGGTGCC TGGCGCATCA CAAGGAAAAC TTCCTGTACA CGCACTTCGA CGAGATCTGC
GAAATCATGA AGGCGTACGA CGTGTCGTTC AGCCTGGGTG ATGGCTTGCG CCCCGGTTGC
ATTGCCGACT CGAACGACGC CGCGCAATTC GGCGAGCTGC ACACGCTGGG CGAACTGACC
AAGAAGGCGT GGGAGCACGA CGTGCAGGTC ATGATCGAAG GCCCGGGCCA CGTGCCGCTG
CAGCGCGTGC AGGCCAACAT GGACGAAGAG CTGAAGCACT GCTTCGAAGC CCCGTTCTAC
ACGCTTGGGC CCCTGGTGAC CGACATCGCC CCGGGCTACG ACCACATCAC CAGCGGCATC
GGCGCGGCCA ACATCGGCTG GTACGGCACC GCCATGCTGT GCTACGTCAC ACCCAAGGAA
CACCTGGGCC TGCCCGACAA GGAAGACGTG CGCGAAGGCA TCATCACCTA CAAGATCGCC
GCGCATGCGG CCGACCTTGC CAAGGGCTGG CCGGGTGCGC AGCTGCGTGA CAACGCGCTG
TCGAAGGCGC GCTTCGAATT CCGCTGGGAA GACCAGTTCA ACCTCGGCCT CGATCCGGAG
AAGGCGCGCG CCTTCCACGA TGAAACGCTG CCGGCCGAGG GCGCCAAGAT CGCGCACTTC
TGTTCGATGT GCGGTCCGAA GTTCTGCTCG ATGAAGATCA CGCAGGAAGT GCGCGACTAC
GCGGCCACGC TCGACGCCAA CGCCACCGCC GCCGCAGTTA ACCCAACTGC GGGCATGGAA
GAGAAGTCGA TCGAGTTCCG CAAGAGCGGC AGCAAGATCT ACAGCTAA
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| Protein sequence | MPQAKNAPAA SFDSLQSELD QKFAYPASSK TYIVGSRPDI RVPMRTIKQT ATRTDKGEML
NPPVPVYDTS GPYSDPDVHI DLKAGLAPLR AKWIDERGDT EILSGLSSEY GQTRANDPAT
AHLRFSHISK PRRAKAGANV SQMHYARRGI ITPEMEYVAL RESLNLQALQ DKPEYRQLLK
QHPGFSYGAN LPQRPEDITP EFVRAEVAAG RAIIPANINH TELEPMAIGR NFRVKINGNL
GNSAVTSSLA EEVEKMVWAI RWGADTIMDL STGKHIHETR EWILRNSPVP IGTVPIYQAL
DKTGGVAEDL TWEMFRDTLI EQAEQGVDYF TIHAGVLLRY VPLTADRITG IVSRGGSIMA
KWCLAHHKEN FLYTHFDEIC EIMKAYDVSF SLGDGLRPGC IADSNDAAQF GELHTLGELT
KKAWEHDVQV MIEGPGHVPL QRVQANMDEE LKHCFEAPFY TLGPLVTDIA PGYDHITSGI
GAANIGWYGT AMLCYVTPKE HLGLPDKEDV REGIITYKIA AHAADLAKGW PGAQLRDNAL
SKARFEFRWE DQFNLGLDPE KARAFHDETL PAEGAKIAHF CSMCGPKFCS MKITQEVRDY
AATLDANATA AAVNPTAGME EKSIEFRKSG SKIYS
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