Gene Rpic12D_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3305 
Symbol 
ID8020989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3484723 
End bp3485166 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID644832098 
Productthioesterase superfamily protein 
Protein accessionYP_002983241 
Protein GI241664881 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CGCCATCCCT TTCCGATTAC CCGCTGCAGT CGACCGACAA GCTCCGCTAC 
GGCGACACCG ACCGCCAGGG CCACATCAAC AACGCCGTCT TCGCCACGTA CCTGGAAACG
GGCCGCGTAG AGATGCTCTT CTCGCCCGAC AACCCGCTGG CAGCGCCCGG CTGCGAGTTC
GTCATCGCGC AGCTCGTGCT CGACTTCCGC AACGAAATCC TCTGGCCCGG TTCCGTGCAG
ATCGGCACGC GCGTGGCGAG CGTCGGCCGC AGCTCGGTCA AGCTCGAGCA GGCCATCTTC
CAGAACGGCC AGTGCGCCGC CACGTCGCAA TCGGTGATCG TGCAGATCGA CGTGGCGACG
CGACAAAGCA GCCCCATTTC CGACAGCGCC CGCCAGCGGC TTGCCGCGCT CACCGCCACC
CCAGCCGGCG CAGAAGCGGA GTGA
 
Protein sequence
MTTTPSLSDY PLQSTDKLRY GDTDRQGHIN NAVFATYLET GRVEMLFSPD NPLAAPGCEF 
VIAQLVLDFR NEILWPGSVQ IGTRVASVGR SSVKLEQAIF QNGQCAATSQ SVIVQIDVAT
RQSSPISDSA RQRLAALTAT PAGAEAE