| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3286 |
|---|
| Symbol | |
|---|
| ID | 8020970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3468267 |
|---|
| End bp | 3468746 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644832081 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_002983224 |
|---|
| Protein GI | 241664864 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA CCGACTACAC CGACTACGCC CTGCGCACGC TGATCTACGT GGCCGTGCAC
CCGGACGAGC TCGTCACGAT CCAGCGCATT GCAGATGCCT TCGACATTCC CAAGAACCAC
CTCATCAAGA TCGTCCAGCA GCTTGGGCAG GACGGCTTCC TGCATACGGT GCGGGGGCGC
GCGGGGGGCA TCACGCTCGG CCGCCCGGCC GCCGAAATCA ACCTCGGCGA TGTGGTCCGC
GCCACCGAGC CCGACTTCCG CATGGTCGAG TGCTTCCACG GCGACGACAA CCACTGCGTC
ATCACGCGCG TGTGCGGCCT GCGCGGCGTC CTGCACGCGG CGTTGCGGGC GTACTTTGAG
GTGCTCGACG GCTATACGCT GCAGGATCTG GTCGACAAAC CGAATGCGGT CAGCCGCGCA
TTGGGCGAGG CACCGCTGCC GATGCCGCGT GCGGCCCGGC GCAAAGGCGT TGCAGCGTAG
|
|---|
| Protein sequence | MRLTDYTDYA LRTLIYVAVH PDELVTIQRI ADAFDIPKNH LIKIVQQLGQ DGFLHTVRGR
AGGITLGRPA AEINLGDVVR ATEPDFRMVE CFHGDDNHCV ITRVCGLRGV LHAALRAYFE
VLDGYTLQDL VDKPNAVSRA LGEAPLPMPR AARRKGVAA
|
|---|
| |